Gene Pnap_2082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2082 
Symbol 
ID4689854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2216978 
End bp2217355 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content62% 
IMG OID639835093 
Productsignal-transduction protein 
Protein accessionYP_982312 
Protein GI121604983 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.077992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA CCATTTCGTC ATTGATGCAG CGCGACGTGT GTTCGGCCGG CGCGGACGAC 
ACCTTGCAGA CCGTCGAATC CAAAATGCTG GCCCGGGGCT TGACCTGGGT GCCGGTGGTG
GATGAAAGCG GCGCGGTGCT CGGCGTCATC AGCAGCCTGG ACCTGCTGCG CTTTCATGCC
GACGGCAAAG ACGCCGCGAA GGTCTGCGCC TGGCAAATCT GCACCTACAA GCCGATTTCG
GTGCCTCCAG ATGCCAGCCT CAGCGACGTG GCCCGGCTGA TGGTCGAGGC CGGCATCCAC
CATGTCGTGG TCATGGACGG CAGCGCCATC AAGGGCGTCG TGTCGTCGCT CGACTTTGTG
AAAACCTTCA AGGACTAG
 
Protein sequence
MKQTISSLMQ RDVCSAGADD TLQTVESKML ARGLTWVPVV DESGAVLGVI SSLDLLRFHA 
DGKDAAKVCA WQICTYKPIS VPPDASLSDV ARLMVEAGIH HVVVMDGSAI KGVVSSLDFV
KTFKD