Gene Pnap_2072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2072 
Symbol 
ID4689858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2201407 
End bp2202135 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content65% 
IMG OID639835083 
ProductABC transporter related 
Protein accessionYP_982302 
Protein GI121604973 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCAA TCGTTGAAGT CGAGCATGTT TTCAAGAGCT TTGGATCGAC CCGTGTCCTG 
GAGGACGTGT CCTTCTCGGT CAACCCCGGG TCGGTGGTCG CCATCATCGG CCGCAGCGGA
TCGGGCAAGA GCACCGCGCT GCGCTGCATT GACCGGCTGG AGATCGTGGA CAGCGGCCGC
ATCCGGGTTG GCGAGCACGA GGTGACCTCG CCGGGGCTGA ACCTGCACCA GTTGCGCCGC
GATGTGGGCA TCGTGTTCCA GAGTTACAAC CTGTTTCCTC ACCTGACGGT CGAGGAGAAC
ATCATGCTGG CGCCGCGCCT GGTGCAAAAA ACCAGCCGCG ATGCGGCGCG CCAGAATGCC
GCGAAGGTGC TGGCGCAAGT CGGCCTGGCC GAAAAGGCCA CCTGCTACCC GTCGCAGCTC
TCGGGCGGCC AGCAGCAGCG CGTGGCCATC GCGCGGTCGC TGGCCATGGC GCCGCAGCTC
ATGCTGTTTG ACGAAGTGAC CTCGGCGCTG GACCCCCAGC TGACCGGCGA GGTGCTGCGC
GTCATGGAAG GCCTGGCCCA GGACGGCATG ACCATGATCC TGGTCACCCA TGAGATGGCG
TTTGCGCGCA AGGTGGCCGA CGAGGTCATC TTCATGCACC AGGGCCGTGT CTGGGAACGC
GGTCCTGCCG CGATGCTCGA CGCACCCACC ACCCCCGAAC TGCGCGATTT CATTGGCAAC
GGCCTCTGA
 
Protein sequence
MLPIVEVEHV FKSFGSTRVL EDVSFSVNPG SVVAIIGRSG SGKSTALRCI DRLEIVDSGR 
IRVGEHEVTS PGLNLHQLRR DVGIVFQSYN LFPHLTVEEN IMLAPRLVQK TSRDAARQNA
AKVLAQVGLA EKATCYPSQL SGGQQQRVAI ARSLAMAPQL MLFDEVTSAL DPQLTGEVLR
VMEGLAQDGM TMILVTHEMA FARKVADEVI FMHQGRVWER GPAAMLDAPT TPELRDFIGN
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