| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2064 |
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| Symbol | |
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| ID | 4689378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2191953 |
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| End bp | 2193182 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639835075 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_982294 |
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| Protein GI | 121604965 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.380103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAACCA GCGCTTCGGC GATTTCCGCT TCTTGCATCA GCCCGGCCAC GCGCCGCTCC
ATCTTGCTGC TGTCGCTGGG CACCTTCGCC AGCATGGCGG CGCAGCGCAT CTGCGACGCC
ATGCTGCCCG AGTTGTCGCG CGTGTTCGCG GTCAGCCTGG CGCAGGCCGC GCAGGTGGTG
TCGGTGTTTG CCATCACCTA CGGCGCGTCG CAGCTGTTTT ACGGACCGCT GGGCGACCGG
CTGGGCAAGT TCCGAGTCAT CACCTTTGCC ACGCTGGGCT GCAGCGTCGG CAGCATTTTG
GCCGTGTTCG CCGGCACGCT TGAAGCGCTG GTGTTTGCGC GCCTGCTGAT GGCGCTGGGC
GCGGCAGCCC TGATTCCGCT GGCGATGGCC TGGGTGGGCG ACTCGGTGCC GTCCGACCAG
CTCCAGGAAA TGCTGACCCG CACCGGGCTG GGCAGCACGC TGGGCATCGT CGGCGGTCAG
CTGGCCGGCG GCTTGCTGAC CGATGCGCTG GGCTGGCGCT GGGCGTTTGT CTTCATGACG
CTGCTGTTCG GCGTGGTCGG CGCGCTGATG CATGCTGACC TGCGCCGGCA GCAGGCCAGG
CCCGCGAAGG CCGTGGCTCA CGGCCAGCCG GTGGTGCGCC ATGGGTTTGC CAGGCAGGCC
CTGCTCATCG TCACCGGCCC CTGGTCGCGC GTCATCTTGC TGATGGCGCT GGTCGAAGGC
GCGGCCGGTT TCGGCGTGCT GGCCATCTGG GCATCGCACC TGCACCGCTC GCTCGGCCTG
TCGCTGTCGA TGGCGGGCGC CATCGTGGCG CTGTTCGGGT TGGGCGGCAT GCTCTACATG
GCTGTCGGCC GCCACCTGAT TCGCCGCTTT GGCCAGCAGG GGCTGGTGCT GATCGGCGGG
GCCATCGTGG GCGTGTGCGC CTTGGTGCTG GCCTACACCC CGCACTGGGG GCCGGCGCTT
CCGGCGAGCC TGCTGGCCGG GTTCGGCTTT TTCATGTTTC ACAACACCAT GCAGGCGAAC
GCCACGCAGA TGGCCCCGCA TGCGCGCGGC ACGGCGGTGT CGCTGTTTTC ATCGTTTTTG
TTTTTGGGCC AGTCGATTGG CGTGGTGCTC GCCGCCAGCC TGATCGACCG GATCGGAACC
GGCGCCGTGG TGGCGCTGGG CGGCGGGGTG ATGGCGGTGG AGGGGGTGTT TTTTGCCTGG
GTGCTGCGGC GGCGGGATGG GCGGGTGTGA
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| Protein sequence | MSTSASAISA SCISPATRRS ILLLSLGTFA SMAAQRICDA MLPELSRVFA VSLAQAAQVV
SVFAITYGAS QLFYGPLGDR LGKFRVITFA TLGCSVGSIL AVFAGTLEAL VFARLLMALG
AAALIPLAMA WVGDSVPSDQ LQEMLTRTGL GSTLGIVGGQ LAGGLLTDAL GWRWAFVFMT
LLFGVVGALM HADLRRQQAR PAKAVAHGQP VVRHGFARQA LLIVTGPWSR VILLMALVEG
AAGFGVLAIW ASHLHRSLGL SLSMAGAIVA LFGLGGMLYM AVGRHLIRRF GQQGLVLIGG
AIVGVCALVL AYTPHWGPAL PASLLAGFGF FMFHNTMQAN ATQMAPHARG TAVSLFSSFL
FLGQSIGVVL AASLIDRIGT GAVVALGGGV MAVEGVFFAW VLRRRDGRV
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