Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2039 |
Symbol | |
ID | 4690173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2165127 |
End bp | 2165966 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639835048 |
Product | modD protein |
Protein accession | YP_982269 |
Protein GI | 121604940 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | [TIGR01334] putative molybdenum utilization protein ModD |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.197629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCCC TCAACGACAC CCAACTTTGC AGCCTGCTCG ACGACGACAC CCTCGGCGGC GACCTGACCA CGCACAGCCT GGGGCTGGCC GAACAGCCCG CGCGGCTGGA GTTCCGCGCC CGCCAGCCGA TGACGGTGTG CGCCAGCGAA GAGGCGCTGC GCCTGTTCGA GCTGGCAGGC AGCCAGGCGC GCTTGCTGAT GCGCTCGGGC AGCCGCGCTG GCGCGGGCGA GTTGATCCTC GAAGCCCAAG GCGATGCCGC CAGCCTGCAC CTGGCCTGGA AAACCGCCCA GAACCTGGTC GAATGGGCCA GCGGCATCGC CAGCGCCACG GCGGCCATCG TCGCGGCAGC CGGCGGCGTG GCCGTGGCCT GCACGCGCAA GAACGTGCCC GGCACCAAGG CACTGTCCAT CAAGGCCGTG CGGGCCGGCG GCGGCGGCAT CATGCACCGG CTCGGCCTCT CGGAAACGCT GCTGGTGTTC GCCGAACACC GATTGTTTTT AACCGACACC CCGGCGCAGA CCATCGCGCA ACTGCGCCGC ACCCAGCCCG AGAAAAAAAT CATCGTCGAA GTCGGCGACC CCGGCGAGGC GCTGCGCTGG GCGCTGGCTG GCGCGGACGT GCTGCAGCTC GAAAAATTCA CGCCCGAAGC CGTCGCCACC TGCCGCGAGG CGCTGCAAGC CTTTCCAGCC GCCAGCCGCC CGCTGCTGGC CGCTGCGGGC GGCGTTCGCG CCGGCAACGC TAGCGCCTAC GTCGCAGCGG GCGCCGACCT GCTGGTCACG TCCGCGCCCT ACACCGCCCC GCCGCAAGAC GTGCAGGTAA CATTTTTCGT CAACGCCTGA
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Protein sequence | MRALNDTQLC SLLDDDTLGG DLTTHSLGLA EQPARLEFRA RQPMTVCASE EALRLFELAG SQARLLMRSG SRAGAGELIL EAQGDAASLH LAWKTAQNLV EWASGIASAT AAIVAAAGGV AVACTRKNVP GTKALSIKAV RAGGGGIMHR LGLSETLLVF AEHRLFLTDT PAQTIAQLRR TQPEKKIIVE VGDPGEALRW ALAGADVLQL EKFTPEAVAT CREALQAFPA ASRPLLAAAG GVRAGNASAY VAAGADLLVT SAPYTAPPQD VQVTFFVNA
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