| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1984 |
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| Symbol | |
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| ID | 4688110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2106056 |
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| End bp | 2108137 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639834992 |
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| Product | transketolase |
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| Protein accession | YP_982214 |
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| Protein GI | 121604885 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACA CCCCAAGCCC CGAACTCGCC CGGCAGATGG CCAACGCCAT CCGCATGCTC
GCCGTCGATG CGGTCGAAAA AGCCAAGTCC GGCCACCCCG GCGCCCCCAT GGGCATGGCC
GACATCGCCG AAGTGCTGTG GAACCGGCAT TTGCAGCACA ACCCGGTCAA CCCGCACTGG
CCCGACCGCG ACCGCTTCGT GCTGAGCAAC GGCCACGGCT CGATGCTGAT CTATGCGCTC
TTGCACCTGA CCGGCTACGA CCTGCCGATG ACCGAACTCA AAAACTTTCG CCAGATGCAC
AGCAAGACCC CCGGCCATCC CGAAGTCGGC TTGACGCCGG GCGTGGAAAC CACCACCGGC
CCGCTCGGCC AGGGGCTGAG CAACGCGGTC GGCATGGCGC TGGCCGAAAA GCTGCTGGCC
CAGGAATTCA ACCGGGAAGA AGGAGAAGAG GGCGGCGTCA GGCACACCAT CGTCGATCAC
TTCACCTACG CCTTCATGGG CGACGGCTGC CTGATGGAAG GCATCAGCCA TGAAGCCTGT
TCGCTGGCCG GTACGCTGCG GCTGTCCAAA CTGGTGGCGC TGTACGACGA CAACGGCATC
TCGATCGACG GCCATGTCGA AGGCTGGTTC ACCGACGACA CGCCCAGGCG CTTCGAGGCC
TACGGCTGGA ACGTGATTGC GGCGGTAAAC GGCCATGACG CGGCAGCCGT GGACGCAGCG
ATTCGCGCCG CCAAGGCGCA GGCCCGCCTG CCCGATGGCA AGCCGACGCT GATCTGCTGC
AAGACCGTGA TCGGCATGGG CTCGCCGCAC AAGGCTGGCA CGCACGACGT GCATGGCGCC
GCGCTCGGCC CGGCCGAAGT CGCCGCCACC CGCGAGGCGC TGGGCTGGAG CGCCGCGCCG
TTCGAGATTC CCGACGCGGT GGCCAGCGCC TGGAACGCCG TGGCGCGCGG CCAGAGCGCC
GAACGCGCCT GGCGCTTGCG CTTCGAGGCC TACCGCACGC AGTTTCCGGC GGAAGCGGCC
GAATTCGAGC GCCGCATGGC CGGCGACCTG CTGCCCGGAT TCGCCGATCA ACTGCCCGGA
CTGCTGGCCA CCATCGCCGC CCGGCCCGAG GCCTTCGCCA CGCGCAAGTC CAGCCAGAAC
GCGCTTGACC TGCTGGCGCC GCTGCTGCCC GAGTTCTTCG GCGGCAGCGC CGACCTGACC
GGCTCGAACC TGACCAATTT CAAGGGCTGC GTGAAGGCCG GCCGCGACCA GTGGGGCAAC
CACCTGAGCT ACGGCGTGCG CGAGTTCGGC ATGGCCGCGA TCATGAACGG CATGGCGCTG
CACGGCGGCT TCATCCCCTA CGGCGGCACG TTTTTGACCT TCAGTGACTA CAGCCGCAAC
GCCATCCGCA TGGCCGCGCT GATGAAGCTG CAGGTGATCC ACGTCTTCAC CCACGACAGC
ATCGGCCTGG GCGAGGACGG CCCGACGCAC CAGAGCGTCG AGCACATTCC CAGCCTGCGC
ATCATTCCCG GCCTGGACGT GTGGCGCCCG GCCGACGGGC TCGAAACCGC CGTCGCCTGG
GCCTCGGCCA TCGAGTGCAA GGACGGCCCG AGCGTGCTGT GCCTGTCGCG CCAGAACCTG
CCGCGCCTGG CCGATGCCGG CATGACCGGC CTGATCCGGC GTGGCGGCTA TGTGCTGTCT
GACATGATAG GCGCGCAGGC GGTGATCATC GCCACCGGCT CGGAGTTGGA GCTGGCCATG
CAGGCGCAGG CCGCGCTGGC GGAGGAGGGC ATTGCCACCC GCGTGGTGTC CATGCCGTCC
ACGTCCGTCT TTGACCGGCA GTCCGAGGCT TATCAGGAAG CGGTGCTGCC CCTTAACCTG
CCCGCAGTCG CCATCGAGGC GGCGCACCCG GACTTCTGGC GCAAGTACGT CGGCCGCACC
GGCCGGGTCG TGGGCATCGC CAGCTTTGGC GAATCGGCCC CGGCCAAGGA CTTGTACGCG
CACTTCGGCA TCACCACCGA GCGCGTGGTC GAGGCGGTGC GCGCGCTGGC GCCCAGGTGC
GAAGCCGCGC TGCCCGAAGC CGCCCTGTTG TCCACCGACT GA
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| Protein sequence | MNNTPSPELA RQMANAIRML AVDAVEKAKS GHPGAPMGMA DIAEVLWNRH LQHNPVNPHW
PDRDRFVLSN GHGSMLIYAL LHLTGYDLPM TELKNFRQMH SKTPGHPEVG LTPGVETTTG
PLGQGLSNAV GMALAEKLLA QEFNREEGEE GGVRHTIVDH FTYAFMGDGC LMEGISHEAC
SLAGTLRLSK LVALYDDNGI SIDGHVEGWF TDDTPRRFEA YGWNVIAAVN GHDAAAVDAA
IRAAKAQARL PDGKPTLICC KTVIGMGSPH KAGTHDVHGA ALGPAEVAAT REALGWSAAP
FEIPDAVASA WNAVARGQSA ERAWRLRFEA YRTQFPAEAA EFERRMAGDL LPGFADQLPG
LLATIAARPE AFATRKSSQN ALDLLAPLLP EFFGGSADLT GSNLTNFKGC VKAGRDQWGN
HLSYGVREFG MAAIMNGMAL HGGFIPYGGT FLTFSDYSRN AIRMAALMKL QVIHVFTHDS
IGLGEDGPTH QSVEHIPSLR IIPGLDVWRP ADGLETAVAW ASAIECKDGP SVLCLSRQNL
PRLADAGMTG LIRRGGYVLS DMIGAQAVII ATGSELELAM QAQAALAEEG IATRVVSMPS
TSVFDRQSEA YQEAVLPLNL PAVAIEAAHP DFWRKYVGRT GRVVGIASFG ESAPAKDLYA
HFGITTERVV EAVRALAPRC EAALPEAALL STD
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