Gene Pnap_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1961 
Symbol 
ID4687181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2084624 
End bp2084881 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content64% 
IMG OID639834969 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_982191 
Protein GI121604862 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTAG CCATTCCTGC CCGGCTCGTC GAGCTGCTGC CCGGCGAGCA AGCCATCGTC 
AACCTGGGCG GCATCCGCAA GACCATCTCG ATTGCCCTGA TCGACTCGGT CGAGGTCGGC
GACTACGTCA TCGTCCATGT CGGCCACGCC ATTGGAAAAA TAGACCCGGA AGAAGCCGCC
CGCACCCTGG CGATGTTCGG CGAACTGGCC GAGGCCGGCA GCGAGCCTGT TTCTCCCCCC
ATGAAAGCCG CAGCATGA
 
Protein sequence
MCLAIPARLV ELLPGEQAIV NLGGIRKTIS IALIDSVEVG DYVIVHVGHA IGKIDPEEAA 
RTLAMFGELA EAGSEPVSPP MKAAA