| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1949 |
|---|
| Symbol | |
|---|
| ID | 4686638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 2071714 |
|---|
| End bp | 2072835 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639834957 |
|---|
| Product | DNA-directed DNA polymerase |
|---|
| Protein accession | YP_982179 |
|---|
| Protein GI | 121604850 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0470] ATPase involved in DNA replication |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.832044 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACG CCAATACACC CTTGACCGCT TCCCGGCGCC TCGCCCCCTG GCTGCAAATC
CAGCTGGAAA GCCTTCTGGC GCAGCGCGGC CATGCCTGGC TGCTTGGCGG GCCGTCGGGG
CTCGGCCAGT TTGAACTGGC GCTGGCGCTG GCAGCCGCCT GGCTGTGCGA ACAGCCGACG
GCGCAGGGCG CTTGCGGCCA CTGCGGCAGC TGCCATGCGG TGCAGGTCCA TACGCATGCC
GACCTCTGCA TGTTGCTGCC CGAAACCCTG TCGCTGGCGC TGGGCTGGCC ACTGGATGAA
AAAACGCAGG ACGAGCTGGA CAGCAAAAAG CGCAAGCCCA GCAAGGAAAT CAAGGTCGAT
GCGGCGCGCG AAGCGGTGTC GTTCACGCAG TTCACCCGCT CGCGCGGAAC GACCAAGGTG
GTCCTGGTGT TTCCTGCCGA ACGCATGAAC CACATCACGG CCAACACGCT GCTGAAAACC
CTCGAAGAGC CGCCAGGCGC GGTCAAATTC ATTCTGGCCA CCGAAGCGGC GCATCAGCTG
CTGCCGACGA TCCGCAGCCG CTGCCTGGGC CACACCATGG TCTGGCCTGA TTTTGAGCAG
GCTTTGGCCT GGCTTGGCAG CGAAGCTGCC CCTAGGAATA GTGCGGAAGG CAGCCTGAAA
AAGCAGCTCG CTCCTCCTGA AGCCGCTGAT TTGAAGACGC TGTTGCTGGG GGCTGGCGGC
CGTCCCGCGG ACGCGCTGAC ATGGGCGCAA AACAGCCCGG CTGCCGAAGC GGCGCAGCAT
TGGCAGGCTT TGCCCAAAGC CATGGCCCGG GGCGATGTAA GCGCCCTGAC TGACTGGGCG
CCGGCCACGG CGGTCGATGC CCTGCAAAAG CTTTGCCACG ACATGTGGGC GGTCCGGGTG
GGTGCGTCTC CCCGTTTTTT CAGCGCAAAA GACCTGCCCG CATTGGCGTC TGGCAAGCCA
GGCGGTGCGC CTCATCATCC GGCTGGAGCC GGCCTGCAGG CGCTGGCCAG CTGGTCCAGG
GATCTGAACG CCATTGCCCG TACCGTTGAG CATCCCTACA ACCCCGGCTT GCTGATTGAA
TCCCTGGTCA GCCGTGCAAA GACAGCACTC AATGCCAGAT AA
|
|---|
| Protein sequence | MNDANTPLTA SRRLAPWLQI QLESLLAQRG HAWLLGGPSG LGQFELALAL AAAWLCEQPT
AQGACGHCGS CHAVQVHTHA DLCMLLPETL SLALGWPLDE KTQDELDSKK RKPSKEIKVD
AAREAVSFTQ FTRSRGTTKV VLVFPAERMN HITANTLLKT LEEPPGAVKF ILATEAAHQL
LPTIRSRCLG HTMVWPDFEQ ALAWLGSEAA PRNSAEGSLK KQLAPPEAAD LKTLLLGAGG
RPADALTWAQ NSPAAEAAQH WQALPKAMAR GDVSALTDWA PATAVDALQK LCHDMWAVRV
GASPRFFSAK DLPALASGKP GGAPHHPAGA GLQALASWSR DLNAIARTVE HPYNPGLLIE
SLVSRAKTAL NAR
|
|---|
| |