Gene Pnap_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1892 
Symbol 
ID4689408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2014716 
End bp2015102 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content63% 
IMG OID639834899 
Productcytochrome c, class I 
Protein accessionYP_982123 
Protein GI121604794 
COG category[C] Energy production and conversion 
COG ID[COG4654] Cytochrome c551/c552 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.511028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.376618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCATC GCACTCTGCT CGCCGGCCTG ACCGGCCTTC TCATGCTCAC GTCGCTTGCT 
GCATCCGCGG CAGACACCGC CAGCATCGAA AAAGCCCAGA AACTGGCATC CGAGGCGGGC
TGCTTTGCCT GCCACACCGT GAAACATCAG GCGGCCAAGG ACGGCAGCCT GCCTGTTGGA
CCCGCCTGGG AAGATGTTGC AGCGCAGTAC AAAGGCAAGC CCGGCGCGGC TGAGTTCCTG
ACCCGCATCG TGCTGGAAGG CTCCAATCCC TACGCCAGCC ACTGGAAGAA CAAGGCCGCC
GGCCTGGCGA TGCCGCCCAA CGCCGTGGCC ATCAATGAAC GCGATGCGCG TCAGCTGGTG
TCCTGGATTC TCTCGCTCGC CAAGTAA
 
Protein sequence
MIHRTLLAGL TGLLMLTSLA ASAADTASIE KAQKLASEAG CFACHTVKHQ AAKDGSLPVG 
PAWEDVAAQY KGKPGAAEFL TRIVLEGSNP YASHWKNKAA GLAMPPNAVA INERDARQLV
SWILSLAK