| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1885 |
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| Symbol | |
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| ID | 4687392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2009191 |
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| End bp | 2010384 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834892 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_982116 |
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| Protein GI | 121604787 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.569163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.858985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATT CATCCACCCA GCTGATTCAC CACCCCTACA CACCGCCAGC CGGTTTCGAG
GCCGTTTCGC CGGCCGTTCA CAAAGCCTCG ACGATCATCT TTCCCAGCGT TGCCGCCCTG
CGCAACCGCG ACTGGAAGCA CAAGACCGGC TACACCTACG GCCTGCACGG CACGCCGACC
ACTTTCACGC TCGAAGAGCG CATCGCCACG CTCGAAGGCG GCCAGTTCTG CACCCTGGTG
CCCAGCGGAC TGGCGGCTAT CGTGCTGGTG GACATGGCTT TGCTCAAGGC CGGCGATGAA
GTGCTGATTC CCGACAATGC CTATGGCCCG AACAAGGCCT TTGCGCAGGC CGAACTGGCC
TCCTGGGGCA TCACCTGCCA GATGTACGAC CCCATGAATC CGGCTGATCT GGCCGCAAAA
CTGACGCTTA AAACCCGCTT GGTCTGGCTG GAAGCGCCCG GCTCCATCAC GCTGGAGTTC
CCGGACCTGC CCGCGCTGGC CGCCGCCGTC AGGGCGCACA ACGCATCGCC GGGCCAGGCG
CATCCTCAGG GCGTGGTCAC AGCCCTGGAT AACACCTGGG GCGCGGGGCT GGCATTCAAT
GCCTTCGCGC TGGGTGCCGA CATCTCGGTG CAGGCTCTGA CCAAGTACCC GAGCGGCGGC
GCCGACGTGC TGATGGGCTC GGTGGTCACG AACAGCGAAG CGCTGCACCT GCTGGTGCAT
TTCTGCCATA TGCGCGTCGG TTACGGCGTC AGCGGCAATG ATGCCGAACT CGTCCTGCGC
GGCCTGAACA GCATGGCCCT GCGCTATGCC GCCCAGGACG CCGCCACGCG CCAACTGGCC
GGCTGGATGC AGGGCCAGCC GCAGATCGCC GCCGTGCTGC ATCCCGCCTT GCCGGACTCG
CCCGGCCATG CGCAATGGAA GCGGGACTGC CTGGGTGCGG CCTGCCTGTT CAGCGCGGTT
TTCAGGCCCG AATTCACGCA GGCGCAAATT GACCGCTTCT GCGACAGCCT GCAACTCTTC
AGGCTGGGTT ACAGCTGGGC CGGGCCGATG AGCCTGTGCG TGCCGTATGA CATGCCGGCT
TTGCGCGTCG CCAAACCGTG GCCGCACAAG GGCGGCCTGG TGCGATTTTC TGTCGGCCTG
GAGGCGGTGG CCGACCTGCA GGCCGACATC GCCCAGGCTC TTGCCGGACT GTGA
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| Protein sequence | MSHSSTQLIH HPYTPPAGFE AVSPAVHKAS TIIFPSVAAL RNRDWKHKTG YTYGLHGTPT
TFTLEERIAT LEGGQFCTLV PSGLAAIVLV DMALLKAGDE VLIPDNAYGP NKAFAQAELA
SWGITCQMYD PMNPADLAAK LTLKTRLVWL EAPGSITLEF PDLPALAAAV RAHNASPGQA
HPQGVVTALD NTWGAGLAFN AFALGADISV QALTKYPSGG ADVLMGSVVT NSEALHLLVH
FCHMRVGYGV SGNDAELVLR GLNSMALRYA AQDAATRQLA GWMQGQPQIA AVLHPALPDS
PGHAQWKRDC LGAACLFSAV FRPEFTQAQI DRFCDSLQLF RLGYSWAGPM SLCVPYDMPA
LRVAKPWPHK GGLVRFSVGL EAVADLQADI AQALAGL
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