Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1878 |
Symbol | |
ID | 4686476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2001963 |
End bp | 2003114 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639834885 |
Product | GTP-binding protein, HSR1-related |
Protein accession | YP_982109 |
Protein GI | 121604780 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.932644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAACAC AAGCACTCGC CCTTCTGGTG GGGGTCGATC TGGGCCTTCC CAACTTTGAT ACAAATCTGC AGGAACTCGG TTTGCTGGCG CAAACCGCGG GCTTGGAGCC TGTGGCGCGC ATCACCTGCA AACGCAAGGC TCCGGATGCG GCATTGTTTA TTGGCTCGGG CAAGGCTGAT GAAATCAAGA TGCTGGCGCT CGATACGGGC GCCACTGAGG TTTTGTTCGA CCAGTCACTC AGCCCGGCCC AGCAGCGCAA TCTTGAACGG CATCTTGAAA TGCCGGTCAA CGACCGGACG CTGCTGATCC TGGAGATTTT TGCCCAGCGC GCCCGCAGCC ATGAAGGCAA GCTTCAGGTC GAACTGGCGC GCTTGCAGTA TGTGTCAACA CGACTGGTTC GGCGCTGGTC CCACCTGGAG CGGCAAACAG GTGGCGCCGG TGTTCGCGGC GGTCCGGGCG AAAAGCAGAT CGAGCTTGAC AAGCGCATGA TTGGCGATGC CATCAAGCGC ACCAAGGAAC GCCTGACCAA AGTCAAAAAA CAGCGCCAAA CGCAGCGAAA GCAGCGCGAG CGGCGCAACG CACTCTCGAT TTCTCTCGTC GGTTACACCA ACGCCGGAAA ATCAACCCTG TTCAATGCCC TGGTCAAGGC CAGTGCCTAT ACGGCGGACC AGCTTTTTGC AACGCTGGAC ACCACCACAC GCCAGCTTTA TCTCGGCGAG GCGGGTCGCT CTGCATCGCT GTCGGATACA GTCGGCTTTA TTCGCGATCT GCCGCATGGG CTGATTGATG CTTTTGCTGC AACCTTGAAG GAAGCCGTTG ATGCCGACTT GCTGCTGCAT GTGGTTGATG GCTCCAATCC TGACTATCTG GAGCAGATTG AGCAGGTGCA ACGCGTGCTG TCCGAGATCG GTGCCGCCGA TGTGCCGCAA ATACTGGTGT TCAACAAGCT CGATGCCATT GAAAATGGCA GCTTGCCCCT GCATCTGAAA GACCGGTTTG AACTCAGGGA TGCTTTTGAA GGATCCAGCC GCAGTGTCGA ACGCGTGTTT GTGAGTGCTA AAACAGGCGA AGGCCTGAAT TTGCTTCGCG AGTTGCTGGC GGCTCAGGCT GTGAGCGTAC AGGCCAGCGA TATTCCCCAA GCACCCCAAT GA
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Protein sequence | MKTQALALLV GVDLGLPNFD TNLQELGLLA QTAGLEPVAR ITCKRKAPDA ALFIGSGKAD EIKMLALDTG ATEVLFDQSL SPAQQRNLER HLEMPVNDRT LLILEIFAQR ARSHEGKLQV ELARLQYVST RLVRRWSHLE RQTGGAGVRG GPGEKQIELD KRMIGDAIKR TKERLTKVKK QRQTQRKQRE RRNALSISLV GYTNAGKSTL FNALVKASAY TADQLFATLD TTTRQLYLGE AGRSASLSDT VGFIRDLPHG LIDAFAATLK EAVDADLLLH VVDGSNPDYL EQIEQVQRVL SEIGAADVPQ ILVFNKLDAI ENGSLPLHLK DRFELRDAFE GSSRSVERVF VSAKTGEGLN LLRELLAAQA VSVQASDIPQ APQ
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