Gene Pnap_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1825 
Symbol 
ID4686868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1944186 
End bp1944602 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content68% 
IMG OID639834831 
Producthypothetical protein 
Protein accessionYP_982056 
Protein GI121604727 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.651269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTGGC GAAAAGGGCA AGCGTATGGG CAGGATTTGC GCGACCGGGT GCTGGCCGCG 
CCAGGGGTGC TGCGCGAGGT CGCCGAGCGC TTTGGCGTGA GCCAGTCGTA TGTCTGCCGG
GCGCGGGCAC GCCGCAAGCG GCTTGGCCAG ACGAGCCCGG GCGCGCAGCA CAACCACATG
CCGCTGCGCC TGGCCGCGCT GGAGCCGGCG TTGCGCGAGC AGGTGGCGGC AGCGCCGACG
CAGACGTTGC GCGAGCTGTG CCAGTGGGTG CGTGCGGAGC ACGGCATCGA GGTGGGCACA
ACAACGATGT GCAAGACCTT GGGCCGGTTC GGGCTGACGC TAAAAAAAAA TCACCCTGCA
CGCCGCCGAG CAGGCAAGGC CCGATGTGGT CCAGGCGCGT ACGAACTGGA AGGCTGA
 
Protein sequence
MSWRKGQAYG QDLRDRVLAA PGVLREVAER FGVSQSYVCR ARARRKRLGQ TSPGAQHNHM 
PLRLAALEPA LREQVAAAPT QTLRELCQWV RAEHGIEVGT TTMCKTLGRF GLTLKKNHPA
RRRAGKARCG PGAYELEG