Gene Pnap_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1661 
Symbol 
ID4690129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1756425 
End bp1757069 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content66% 
IMG OID639834666 
Producthypothetical protein 
Protein accessionYP_981896 
Protein GI121604567 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.823768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAGTC ACTACGAATC CGTGCAAAAC CGGCAGCGCT ACCAGCGCCA TTTCGGTGTC 
GAGCCACCGG CCGATACGGG CAAGGCTGAT GTCTGGCCGC TGTACGCAGC CAGCCTGATC
CGCCGCCCGC CTGAGGCCGA GGCCGGCGAT GAAGCCGTGC CCGAGCGCGA AGCCCTGCCC
GGCCAGTTCG GCCTGGTTGC GCACTGGGCC AAGGACAGCG CCGTGGGCCG GCGCACCTAC
AACGCGCGCA GCGAGACGGC CGCGAGCAAG CCGAGTTTTC GCGATGCCTG GCAGCGCGGC
CAGCGCTGCA TCATTCCGGT CGAGGCTTTC TTTGAGCCCG ACTGGCGCAG CGGCAAGGCC
GTTGCCACGC GCATCACCCG CGCCGATGGC AAGCCCATGG GCCTGGCCGG CCTGTGGTCG
CGCTGGAAAT CGCCCCAGGG CGAAGTGCTG CACAGCTTTT GCATGCTGAC CATCAACGCG
GACAGCCATG CGCTGATGAA AAACTACCAC AAGCCGGCGG ATGAAAAAAG AATGGTGGTG
GTATTGCCGG ACGGGGCTTA TCACGACTGG CTGGCAGCGC CCGTGGCGCA AACCATGGAC
TTCATGCAGC CCTACCCAGC CGGCCAGCTG GCGGCGGCGT CATGA
 
Protein sequence
MCSHYESVQN RQRYQRHFGV EPPADTGKAD VWPLYAASLI RRPPEAEAGD EAVPEREALP 
GQFGLVAHWA KDSAVGRRTY NARSETAASK PSFRDAWQRG QRCIIPVEAF FEPDWRSGKA
VATRITRADG KPMGLAGLWS RWKSPQGEVL HSFCMLTINA DSHALMKNYH KPADEKRMVV
VLPDGAYHDW LAAPVAQTMD FMQPYPAGQL AAAS