Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1659 |
Symbol | |
ID | 4690064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1753876 |
End bp | 1754820 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639834664 |
Product | LysR family transcriptional regulator |
Protein accession | YP_981894 |
Protein GI | 121604565 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.337839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.66809 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAACAC CCGATCTCAA CTTGCTGGTC ACCCTGGATG TATTGCTCCA GGAAGGCAGC GTTGCGCGCG CCGCTGTGCG CTTGCGGCTG AGCCCATCGG CGATGAGCCG GGCGCTGGCG CGATTGCGGG AGACGACGGG CGATCCGCTG CTGGTCAGGG CCGGGCGCGG CCTCGTTCCC ACGCCCCGCG CGGTCGAGCT GCGCGAGCGG GTCAGCCAGC TCGTGCAGGA CGCCCAGGCG GTTCTGCGCC CTGCCGAGAA GCTCGACCTC CAGCAACTGA TACGAACCTT CACGCTGCGC ACCAGCGAAG GCTTTGTCGA GAACTTCGGC CCCAGCCTCA TTGCCCGCGT CGGCGAGCAA GCGCCCGGCG TGCGGCTGCG CTTTGTGCCC AAGCCGGACA AGGACAGCGC GCCACTGCGC GACGCAAGCG TCGATCTGGA AACCGGCGTT GTGGGAAAAA CGACGGCGCC GGAGGTGCGC GCGCAGGCCT TGATCCGCGA CCGTTTCATT GGCGTCGTGC GCATGGGGCA CGCGCTGAGC CAGGGCGAGA TCACGCCCGC CCGTTATGCG GCTGGCAGGC ACATCTGCGT CTCGCGGCGG GGGCTCGACA GGGGTCCGGT TGATGAAGCC CTGGCGCCAT TCGGGCTGCA AAGGCAGATC GTCACGACCG TCGCCGGCTT TTCGGCCGCG CTGGCACTGG CCCGGGCCTC CGACCTGATC GCCAGTGTTC CCGAACGGCA CACCGGAAAC CTGCGCGCCG GAATGCACAG TTTTCCCCTT CCGGTCGCCA CGCCGGAGAT CACGGTGTCA TTGCTCTGGC ACCCGCGGCT CGATGCCGAC CCCGCGCATC GCTGGCTGCG CGGGTGTGTT CGGGATGCCT GCGCCGGGCA ACTCACGGAT GCATCGGCAT GCGCTGCCGG GCCAGCGAGC GCTCCACTCG CCTGA
|
Protein sequence | MSTPDLNLLV TLDVLLQEGS VARAAVRLRL SPSAMSRALA RLRETTGDPL LVRAGRGLVP TPRAVELRER VSQLVQDAQA VLRPAEKLDL QQLIRTFTLR TSEGFVENFG PSLIARVGEQ APGVRLRFVP KPDKDSAPLR DASVDLETGV VGKTTAPEVR AQALIRDRFI GVVRMGHALS QGEITPARYA AGRHICVSRR GLDRGPVDEA LAPFGLQRQI VTTVAGFSAA LALARASDLI ASVPERHTGN LRAGMHSFPL PVATPEITVS LLWHPRLDAD PAHRWLRGCV RDACAGQLTD ASACAAGPAS APLA
|
| |