| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1596 |
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| Symbol | |
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| ID | 4686162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1679672 |
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| End bp | 1680583 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834599 |
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| Product | 5-dehydro-4-deoxyglucarate dehydratase |
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| Protein accession | YP_981831 |
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| Protein GI | 121604502 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCCGC AAGACCTCAA AACCATCGTC AGTTCCGGCC TCCTGTCTTT CCCCGTCACC
GACTTTGACG AGCAGGGCGA TTTCCGTCCC AAGACCTACA TCGAGCGTCT CGAATGGCTG
GCCCCTTACG GCGCCACCGC GCTGTTCGCC GCCGGCGGCA CGGGCGAGTT CTTTTCGCTG
ACGGGCGACG AGTACCCGCT GATCATCAAG ACGGCGGTGA ACACCTGCGC CGGCAAGGTG
CCGATCATTG CCGGCGTCGG CGGCCCGACC CGTTTTGCGA TTGCCTGCGC GCAGGAAGCC
GAGCGCCTGG GCGCCCACGG CATCTTGCTG CTGCCGCACT ACCTGATGGA AGCCGGCCAG
GAAGGGCTGA TTGCCCATGT CGAGGCCGTC TGCAAGAGCG TGAAGTTCGG CGTGATCGTG
TACAACCGCA ACGTCTGCAA GCTCACGCCC GAGTCGCTGG CGATTCTGGC CGACCGCTGC
CCGAACCTGA TCGGCTTCAA GGACGGCGTG GGCAACATCG AAACCATGTC GTCGATCTTC
ATGAAGATGG GTGACCGCTT TTCTTATCTG GGCGGCCTGC CCACGGCCGA GGTCTATGCC
GCCGCCTACA AAGCGCTGGG CACGCCGGTG TATTCGTCGG CGGTGTTCAA CTTCATCCCC
AAGACGGCGA TGGATTTCTA CCATGCGGTT GCCAGCGACG ACCTGGCCAC ACAGCACCGC
CTCTTGAGAG ACTTCTTCAT GCCTTACCTG GCGCTTCGCA ACAAGAATCC TGGCTACGCG
GTCAGCATCG TCAAGGCCGG CGCCACCATC GTCGGGCATG ACGCCGGCCC GGTGCGTCCG
CCCCTGACCG ACCTCAAGCC GGCCGAGATG GAAGAGCTGG CCGTGCTGAT CAAGAGCCTC
GGCCCGCAGT AA
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| Protein sequence | MNPQDLKTIV SSGLLSFPVT DFDEQGDFRP KTYIERLEWL APYGATALFA AGGTGEFFSL
TGDEYPLIIK TAVNTCAGKV PIIAGVGGPT RFAIACAQEA ERLGAHGILL LPHYLMEAGQ
EGLIAHVEAV CKSVKFGVIV YNRNVCKLTP ESLAILADRC PNLIGFKDGV GNIETMSSIF
MKMGDRFSYL GGLPTAEVYA AAYKALGTPV YSSAVFNFIP KTAMDFYHAV ASDDLATQHR
LLRDFFMPYL ALRNKNPGYA VSIVKAGATI VGHDAGPVRP PLTDLKPAEM EELAVLIKSL
GPQ
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