Gene Pnap_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1587 
Symbol 
ID4686051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1670137 
End bp1670463 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content60% 
IMG OID639834590 
Productferredoxin 
Protein accessionYP_981822 
Protein GI121604493 
COG category[R] General function prediction only 
COG ID[COG3894] Uncharacterized metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.613502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC TCACCCCTGA ATCCGCACAA ACCACCATGA CGACCATGAC CGTCATGCCT 
TCCGGCAAAT CCTATGAAGT CGCGACCGGC ACGACCTTGC TCAAGGCCCT GCAATCCGTC
GGCGAGCCGA TCAAGAGCAA ATGCGGCGGC GAAGCCAAAT GCGAAGCCTG CCACGTCTTC
GTCACGTCAG GCCGCAAGAC CCTGTCCAAG ATCAGGCCCG CGGAAAACGA AAAGCTCGAC
GGCATGGTCG GCATCAGCTC CAACTCCCGC CTGGCCTGCC AGGCCGTGCT GGGTACAGAG
CCGATCACCG TTGAATTGAT CGCCTAA
 
Protein sequence
MTTLTPESAQ TTMTTMTVMP SGKSYEVATG TTLLKALQSV GEPIKSKCGG EAKCEACHVF 
VTSGRKTLSK IRPAENEKLD GMVGISSNSR LACQAVLGTE PITVELIA