Gene Pnap_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1534 
Symbol 
ID4687507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1623331 
End bp1624095 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content70% 
IMG OID639834537 
Productcytochrome B561 
Protein accessionYP_981769 
Protein GI121604440 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC ATACCTTTCC TTCTCCAGAA CCCTCTGCCG CGCCGGCTGG CGCGCAAACC 
CAGGCGCCCC GTCCGCAAAG CCGCCGCGTG GTGGATGCGA CCACGCGCAT GCTGCACTGG
CTGATGGCGC TGAGCTTTAC CGGCGCCTAC CTCACCGCCG ACGGCGAGCG CTGGCGCCTG
GTGCATGTGA CGCTGGGCTA TACCCTGGCC GGCCTGCTGG TGGCGCGCGT GCTGTGGGGC
CTGCTCGGGC CGCGCCAGGC CAGGCTGGCC ATGCTGTGGC GCAAGTTGCA GGGCCTGCCG
GGCTGGCTGA AGTCGCTGCC GAACGTCAAG TCCATCGCCA CCGCGCAGCC CGCCTGGCGC
CAGGGCCAGA ACCTCATGAT GGCGCTGGCC ATCGTGCTCA TCCTGGGCGT GGTGGTGCCG
CTGACGCTCA GCGGCTACGC GGTCTGGGAC GAGTGGGGCG GCGAATGGCT CGAAGAGGTG
CATGAATTTT TCGGCAATGC CATGCTCGCC GTGGTGCTGG CGCATGTCGG GCTGATTGCC
TTGCTGAGCC TGCTGCGGCG CAAGAACCAG GCGTTGCCCA TGCTGACCGG CCGCGCCGCC
GGCCCCGGCC CGGACCTGGC CAGGCGCAAC CACGGCATTT TGGCGGCCGC TGTGCTGGCC
TGCGTGCTGG GTTTCTGGGG CTGGCAGTGG AGCGAGGCGC CGCAAAACGC GGGCGCCCAG
GACGCGGCGC AGACTGATAA TGCCCGCAAC CCTGACAGCG ACTGA
 
Protein sequence
MTTHTFPSPE PSAAPAGAQT QAPRPQSRRV VDATTRMLHW LMALSFTGAY LTADGERWRL 
VHVTLGYTLA GLLVARVLWG LLGPRQARLA MLWRKLQGLP GWLKSLPNVK SIATAQPAWR
QGQNLMMALA IVLILGVVVP LTLSGYAVWD EWGGEWLEEV HEFFGNAMLA VVLAHVGLIA
LLSLLRRKNQ ALPMLTGRAA GPGPDLARRN HGILAAAVLA CVLGFWGWQW SEAPQNAGAQ
DAAQTDNARN PDSD