Gene Pnap_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1515 
Symbol 
ID4687982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1602898 
End bp1603428 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content62% 
IMG OID639834518 
Producthemerythrin HHE cation binding region 
Protein accessionYP_981750 
Protein GI121604421 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGCT CCATGACCAT GATGGTCGAG CACGGCCCCG GAGACAACCC CGAGCAGTTC 
TTCGACGTGC TGCGCGCCAT GTTGTTCTAC ATCGATGAAT TCCCCGAGCG CCTGCATCAT
CCCAAGGAAT CCGACCTGCT GTTTCCGCGC GTGGTCCGCG CTTCGCCGTC GGTCATGGCG
GCCGTGCAGA AGCTGGAGAA CGACCACATC AACGGTGAAA AAGCCGTGCG CGAACTGCAG
CACCTGCTGC TGGCCTGGGA ACTCCTGGGC GAGCCGCGCA GGCCGGCTTT CGTGGCCGAG
TGCAATCGCT ACGTGAAGTT CTACCTGGAG CACATGCGGC TTGAGGAAAC CGTGATCCTG
CCCGAAGCCG AAAAAGTGCT GACCCCTGCC GAATGGAAGG AACTCGATGC GGCCTTCGAG
AAAAACTGCG ATCCGCTGGC CGGCAAATAT TCGCCCGACC CGGCCTATGA TCGCCTGTTC
ACGCGCATCG TGATGCGGGC GCCAGCGCCG ATTGGGCTGG GCGACGCGTG A
 
Protein sequence
MLRSMTMMVE HGPGDNPEQF FDVLRAMLFY IDEFPERLHH PKESDLLFPR VVRASPSVMA 
AVQKLENDHI NGEKAVRELQ HLLLAWELLG EPRRPAFVAE CNRYVKFYLE HMRLEETVIL
PEAEKVLTPA EWKELDAAFE KNCDPLAGKY SPDPAYDRLF TRIVMRAPAP IGLGDA