Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1510 |
Symbol | |
ID | 4688813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1599517 |
End bp | 1600206 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639834513 |
Product | ABC transporter related |
Protein accession | YP_981745 |
Protein GI | 121604416 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCGC TTTTCAGCCT CGATGCCGTC AGCGTGCGGT TTGGCCGCGT TCCGGCGCTC AGCGACTGCA GCCTGCGCAT TTGCGCCGGC GACAGGCTGG CGCTGGTCGG CTCCAACGGC AGCGGCAAAA GCACCCTGCT GCGCACGCTG CACGGACTCA TTGCGCCTGC AAAAGGGAGT TTTCAGATGG ATGCCCGCGC GCGCCAGGCG ATGCTGTTCC AGCGCCCCTA CATGCTGCGC GCCAGCGTGC TGCACAACGT CGCGCTGGGC TTGTGGCTGA ACAGCGTTCC CTGGACGCTG GCCAAGGCGC AGGCGCTGCA GGCGCTCGAA CGCGTGGGGC TGGCCGACCT GGCCGGGCGC AATGCCAAGG CCCTGTCCGG CGGGCAGCAG CAGCGCGTGG CGCTGGCGCG GGCCTGGGCG CTCCAGCCGC AGGTCTTGCT GCTTGATGAG CCCACGTCCA GCCTCGACCC GGCGGCCAAG CGCGAGGTCG AGCGGCTGAT GGCCGAATTC GCCGACGCCG GCATGACGCT GATCTTCAGC AGCCACAACC TGGGCCAGGT CAAGCGCCTG GCCAGCCGGG TGGTGTATCT GGAGCAGGGC CGGCTGGTCG CCGACTTGCC CACGCATGCT TTTTTCAACG GGCCGTTGCC CGTCGCCGCC GCCAATTTTT TAAAAGGGGA ACTGGGATGA
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Protein sequence | MTPLFSLDAV SVRFGRVPAL SDCSLRICAG DRLALVGSNG SGKSTLLRTL HGLIAPAKGS FQMDARARQA MLFQRPYMLR ASVLHNVALG LWLNSVPWTL AKAQALQALE RVGLADLAGR NAKALSGGQQ QRVALARAWA LQPQVLLLDE PTSSLDPAAK REVERLMAEF ADAGMTLIFS SHNLGQVKRL ASRVVYLEQG RLVADLPTHA FFNGPLPVAA ANFLKGELG
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