Gene Pnap_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1510 
Symbol 
ID4688813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1599517 
End bp1600206 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID639834513 
ProductABC transporter related 
Protein accessionYP_981745 
Protein GI121604416 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGC TTTTCAGCCT CGATGCCGTC AGCGTGCGGT TTGGCCGCGT TCCGGCGCTC 
AGCGACTGCA GCCTGCGCAT TTGCGCCGGC GACAGGCTGG CGCTGGTCGG CTCCAACGGC
AGCGGCAAAA GCACCCTGCT GCGCACGCTG CACGGACTCA TTGCGCCTGC AAAAGGGAGT
TTTCAGATGG ATGCCCGCGC GCGCCAGGCG ATGCTGTTCC AGCGCCCCTA CATGCTGCGC
GCCAGCGTGC TGCACAACGT CGCGCTGGGC TTGTGGCTGA ACAGCGTTCC CTGGACGCTG
GCCAAGGCGC AGGCGCTGCA GGCGCTCGAA CGCGTGGGGC TGGCCGACCT GGCCGGGCGC
AATGCCAAGG CCCTGTCCGG CGGGCAGCAG CAGCGCGTGG CGCTGGCGCG GGCCTGGGCG
CTCCAGCCGC AGGTCTTGCT GCTTGATGAG CCCACGTCCA GCCTCGACCC GGCGGCCAAG
CGCGAGGTCG AGCGGCTGAT GGCCGAATTC GCCGACGCCG GCATGACGCT GATCTTCAGC
AGCCACAACC TGGGCCAGGT CAAGCGCCTG GCCAGCCGGG TGGTGTATCT GGAGCAGGGC
CGGCTGGTCG CCGACTTGCC CACGCATGCT TTTTTCAACG GGCCGTTGCC CGTCGCCGCC
GCCAATTTTT TAAAAGGGGA ACTGGGATGA
 
Protein sequence
MTPLFSLDAV SVRFGRVPAL SDCSLRICAG DRLALVGSNG SGKSTLLRTL HGLIAPAKGS 
FQMDARARQA MLFQRPYMLR ASVLHNVALG LWLNSVPWTL AKAQALQALE RVGLADLAGR
NAKALSGGQQ QRVALARAWA LQPQVLLLDE PTSSLDPAAK REVERLMAEF ADAGMTLIFS
SHNLGQVKRL ASRVVYLEQG RLVADLPTHA FFNGPLPVAA ANFLKGELG