Gene Pnap_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1484 
Symbol 
ID4686737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1572285 
End bp1573100 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID639834487 
Productzinc/iron permease 
Protein accessionYP_981719 
Protein GI121604390 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0428] Predicted divalent heavy-metal cations transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.671333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGA TAGCAATTTT GTTGGGAACC ATCAGCGCCG GCATCGGCAG CGTCTGGCTG 
GCCGCGCTGC TCAGCTTTGG CGCGCTGGCC CGGTACACCC AGCACATGCT CAGCCTGGCC
GCCGGCGCAT TGCTGGGCAC CGCCTTCATG CATTTGCTGC CCGAGGCGTT TGAAAGCCAG
GCCAGCGCCC ACGATTTGTT TGCCACGCTG CTGGTCGGGC TGGTGTTTTT CTTCCTGCTC
GACAAGGCCG AGCTGTGGCA CCACGGGCAT GAGCACCATG GGGTGCCAGG CGACAGCCCC
GGCCCGGACC ACGACCATGC GCATCACGGC CATTCCCATG GCCACGGCCA TGAGCACGCC
TCGGGCGGCT GGGCGGTGCT GGCCGGCGAC AGCGTGCATG CCTTTGGCGA CGGCATCCTG
ATCGCCTCGG CCTTCATCGC CGACATGCGC CTGGGTTTTG TGGCCGCGCT GGCGGTGCTG
GTGCATGAAG TTCCGCACCA CATGGGCGAC CTGATCGTGC TGCGCCGCCA GAGCGCCAAC
AACCGGCGCA TCGCCATCGT CAAGGTGTCG CTGGCCGGCG CCGTCACCGC CCTGGGCGGC
GTGGTCGGCT ATGCGCTGGT GGACCAGCTG TATGGCTACT TGCCGTTCTT TTTGATCATT
GCCGCCAGCA GTTTCATGTA CGTAGCGCTG GCCGATTTGA TTCCGCAGCT GCAAAAACGC
GCCACCCTGC AGGAAACGGC GGCGCAGATT GCGTGGCTGG CCATTGGCAT CGGGCTGGTG
ATGCTGGTCA GCGCGCTGGC AGCGCACGAG CATTGA
 
Protein sequence
MTLIAILLGT ISAGIGSVWL AALLSFGALA RYTQHMLSLA AGALLGTAFM HLLPEAFESQ 
ASAHDLFATL LVGLVFFFLL DKAELWHHGH EHHGVPGDSP GPDHDHAHHG HSHGHGHEHA
SGGWAVLAGD SVHAFGDGIL IASAFIADMR LGFVAALAVL VHEVPHHMGD LIVLRRQSAN
NRRIAIVKVS LAGAVTALGG VVGYALVDQL YGYLPFFLII AASSFMYVAL ADLIPQLQKR
ATLQETAAQI AWLAIGIGLV MLVSALAAHE H