Gene Pnap_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1466 
Symbol 
ID4686689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1552901 
End bp1553920 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content64% 
IMG OID639834469 
Producthypothetical protein 
Protein accessionYP_981701 
Protein GI121604372 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1270] Cobalamin biosynthesis protein CobD/CbiB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTT TTGCCGTTTT GTTCGCACTC ATCCTGGAGC AGGCCCGTCC TCTGGCCCGT 
GGCAACTGGG TTCACTCCGG TTTTTTGGGA TGGGCACGCT GGGCGCATCG CAGCCTGGAT
GCCGGCAAGT CGCACCATGG ATGGATCGCC TGGCTGTTCG CCGTCATGAT TCCCACGCTG
CTCACGCTGC TGGTGCACTG GCTGCTGTGG CAGGTCAACG TCCTGCTGGC CTTTGCCTGG
AGCGTGGCGG TGTTGTATGT CACCCTGGGT TTTCGGCAGT TCAGCCACTA CTTCACCGAC
ATTCGCGATG CGCTGGACGA TGGCGATGAA GACACTGCCC GCGAACTGCT CGCTCAGTGG
CGCCAGGTGG ATGCCAGTGA ACTGCCGCGC AGTGAAATTG TCCGTCACGT CATCGAGTAT
TCGGTGCTGG CCGCCCATCG CCATGTGTTT GGCGTGCTGG GCTGGTTTTC GGTACTGGCT
GCATTCGGGC TGGGGCCTGC CGGGGCGGTG CTGTACCGGA CGAGCGAATT CGTGGCGCGC
TACTGGACCT ACAAAAGCAG GGCGCCGGGC GAGGGGGCCA GTCCGGCCCT TCAGCAGGTG
GCCAACAGCG CTTGGGGCAT CATCGATTTC ATGCCTTCCC GCGTGACCTC CCTGGGGTTT
GCGGTGGTGG GCAGTTTTGA AGATGCCATC GACGCCTGGC GCAATTACAC CCAGCGTTTC
CCGACCGGCG CCGCCGTCGC CACCGCCAGC CGCAACGACG GGCTGATCCT TGCCGCTACT
TCCGGGGCCG TCAACGTGCG CTTGGGCGGC GAAGCGCTTA AAGCCGTGTT GACTCCTTCT
GTTTCCCAGG AATTCGAGGC GGGCGGGCTG GACCCCGACA ATGCAGTCAT CACGGCATCA
ACGCCAGGCC GTGAGCCCGA GGTGGCGCAC CTGCGCAGCG TCGTGGGCCT GGTCTGGCGT
TCGGTGGTGC TGTGGATGGT GCTGCTTGCG CTGCTGACAC TGGCGCGGCT GCTTGGTTAG
 
Protein sequence
MSFFAVLFAL ILEQARPLAR GNWVHSGFLG WARWAHRSLD AGKSHHGWIA WLFAVMIPTL 
LTLLVHWLLW QVNVLLAFAW SVAVLYVTLG FRQFSHYFTD IRDALDDGDE DTARELLAQW
RQVDASELPR SEIVRHVIEY SVLAAHRHVF GVLGWFSVLA AFGLGPAGAV LYRTSEFVAR
YWTYKSRAPG EGASPALQQV ANSAWGIIDF MPSRVTSLGF AVVGSFEDAI DAWRNYTQRF
PTGAAVATAS RNDGLILAAT SGAVNVRLGG EALKAVLTPS VSQEFEAGGL DPDNAVITAS
TPGREPEVAH LRSVVGLVWR SVVLWMVLLA LLTLARLLG