Gene Pnap_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1443 
Symbol 
ID4687250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1532051 
End bp1532587 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content61% 
IMG OID639834446 
ProductMarR family transcriptional regulator 
Protein accessionYP_981678 
Protein GI121604349 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAA AGCACAACTC CCACCCCGAT ATCGACGCGC TGCCCGTTCC TCCGGCTGAT 
TTTTACCGCG TCGAGGGCTA CACGCCTGAC GACAGCGTCG GCTACATGAT GCGGCGCATC
ATTTCGCTGA TGGCGCAAGG CGTGGAGCGA GAACTCGAAC CCTCCGGCCT GACCAATGCG
CAATGGGTGC CGCTGCTCAA GCTGCACATG GGATGCGCTT CAACGGCGGC CGAACTGGCG
CGCCAGTGCG AACTCGATGC CGGCTCCATG ACGCGTTTGC TGGACCGGCT CGAAGGCAAG
CAGTTGTGCC AGCGCACCCG GTCCAGCGAC GACCGGCGCG TGGTCAATCT GGAGCTGACC
GACGCCGGCC GCGAGGCCGC CAAAGAGATT CCGGGCATTC TTTGCGGCAT GCAAAACGCG
CTGCTGGCCG GCTTTTCGGT GGAAGAGTGG ACCACGCTCA AAAGCTATCT GCGCCGCATG
CTCGATACGG CGCAAACCCT GCAGGCATTG GCTGACAAAA ATGAAAAATC CAACTAA
 
Protein sequence
MDSKHNSHPD IDALPVPPAD FYRVEGYTPD DSVGYMMRRI ISLMAQGVER ELEPSGLTNA 
QWVPLLKLHM GCASTAAELA RQCELDAGSM TRLLDRLEGK QLCQRTRSSD DRRVVNLELT
DAGREAAKEI PGILCGMQNA LLAGFSVEEW TTLKSYLRRM LDTAQTLQAL ADKNEKSN