| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1443 |
|---|
| Symbol | |
|---|
| ID | 4687250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1532051 |
|---|
| End bp | 1532587 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639834446 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_981678 |
|---|
| Protein GI | 121604349 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCAA AGCACAACTC CCACCCCGAT ATCGACGCGC TGCCCGTTCC TCCGGCTGAT
TTTTACCGCG TCGAGGGCTA CACGCCTGAC GACAGCGTCG GCTACATGAT GCGGCGCATC
ATTTCGCTGA TGGCGCAAGG CGTGGAGCGA GAACTCGAAC CCTCCGGCCT GACCAATGCG
CAATGGGTGC CGCTGCTCAA GCTGCACATG GGATGCGCTT CAACGGCGGC CGAACTGGCG
CGCCAGTGCG AACTCGATGC CGGCTCCATG ACGCGTTTGC TGGACCGGCT CGAAGGCAAG
CAGTTGTGCC AGCGCACCCG GTCCAGCGAC GACCGGCGCG TGGTCAATCT GGAGCTGACC
GACGCCGGCC GCGAGGCCGC CAAAGAGATT CCGGGCATTC TTTGCGGCAT GCAAAACGCG
CTGCTGGCCG GCTTTTCGGT GGAAGAGTGG ACCACGCTCA AAAGCTATCT GCGCCGCATG
CTCGATACGG CGCAAACCCT GCAGGCATTG GCTGACAAAA ATGAAAAATC CAACTAA
|
|---|
| Protein sequence | MDSKHNSHPD IDALPVPPAD FYRVEGYTPD DSVGYMMRRI ISLMAQGVER ELEPSGLTNA
QWVPLLKLHM GCASTAAELA RQCELDAGSM TRLLDRLEGK QLCQRTRSSD DRRVVNLELT
DAGREAAKEI PGILCGMQNA LLAGFSVEEW TTLKSYLRRM LDTAQTLQAL ADKNEKSN
|
|---|
| |