Gene Pnap_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1440 
Symbol 
ID4686261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1528102 
End bp1528629 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content58% 
IMG OID639834443 
Producthypothetical protein 
Protein accessionYP_981675 
Protein GI121604346 
COG category[S] Function unknown 
COG ID[COG5319] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCC TGAATCTTCG ATGTTCGCAC CTGCATTCGT TTGAAGGCTG GTTTGGTTCG 
GAGGACGATT TTCAAGGCCA GTTGAAGCGC GGCCTGGTTG AGTGCCCGAT GTGCGCCGAC
AGTGCCATTC AAAAAATGCC CAGTGCGCCC CGTCTCAATT TTGGCGGCCA CCAGGCCCGT
GATTCCGAGC AGGCCCTTCA GGGGCAAGCT GCAACTCCTG CATCAACCGC GATGGCGCCA
TTGAAAAACG AAGCAGTGCG CAGTGATCCG CCTGAAAACG GCAGTCCGGA CAGACTCAAT
CCTGCCGCAC AGGCTGCATT TTTAACTGCC TTGCGCCAGG TCATTGCAAA TACCGAAGAT
GTCGGCCAGC GATTCGCTGA CGAGGCACGC CGCATGCACT ACGGCGAAGC CGAAGCCCGC
AGCATTCGCG GTCAGGCCAG TGCACGGGAA GCCGTAGAGC TGCTGGAGGA GGGGATTGAA
GTCATGCCGC TTCCCATGCT GCCGGCCCTC AAGGAAACCC TGCAGTAA
 
Protein sequence
MKVLNLRCSH LHSFEGWFGS EDDFQGQLKR GLVECPMCAD SAIQKMPSAP RLNFGGHQAR 
DSEQALQGQA ATPASTAMAP LKNEAVRSDP PENGSPDRLN PAAQAAFLTA LRQVIANTED
VGQRFADEAR RMHYGEAEAR SIRGQASARE AVELLEEGIE VMPLPMLPAL KETLQ