| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1422 |
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| Symbol | tpiA |
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| ID | 4689823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1511157 |
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| End bp | 1511885 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639834424 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_981657 |
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| Protein GI | 121604328 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.192091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGGCA GCTTGACTGC CAATGAAGAA CTGCTGGCCG CGCTTGCTGC CGGGCTGGCT
CAAAGCCCGC CCTGCGAGAT CGCCGTCTGC GTGCCTGCAC CTTACCTGGC ACAGATTCAG
TCCTTGAAAT CGAAACACGC GGCCTTGTCT GTCGTTGACG TGGGCGCGCA GGATGTATCC
GCCCACGCTT CAGGCGCCTA CACCGGCGAA GCCAGTGCAG CCATGCTCAA GGAACTGGGG
TGCCGCTACG TCATCATCGG TCATTCGGAG CGCCGTCAGT ACCACGCCGA AACTGATGCA
CTGGTGGCCG AGAAGGCCAG GGCTGCGCTG GCTGCGGGCA TCACGCCCAT CGTCTGTGTT
GGTGAAACAT TGACCGAGCG CGAAGCCGGC CGTACCGAAG AGGTGGTCAA GCGTCAACTG
GCGGCCGTCA TCCATGCCAA CGGGCACTGC ATCAGCGAGA TCGTTGTCGC TTATGAGCCG
GTTTGGGCCA TCGGGACCGG CAAGACCGCC TCGCCAGAGG AGGCACAGGC CGTGCATGCG
GTGCTGAGAG CGCAGCTCAA GGCGGCAACC GACCAGTCAG CCCGAATCAA GATTCTGTAT
GGCGGCAGTA TGAATGCAGC TAACGCTGCG ACTTTGCTGG CTCAGCCCGA CATTGATGGC
GGCCTGATAG GCGGCGCTTC GCTCAAGGCA CCGGATTTTT TGAAAATTAT TGCTGCTGCG
CCCGTTTGA
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| Protein sequence | MNGSLTANEE LLAALAAGLA QSPPCEIAVC VPAPYLAQIQ SLKSKHAALS VVDVGAQDVS
AHASGAYTGE ASAAMLKELG CRYVIIGHSE RRQYHAETDA LVAEKARAAL AAGITPIVCV
GETLTEREAG RTEEVVKRQL AAVIHANGHC ISEIVVAYEP VWAIGTGKTA SPEEAQAVHA
VLRAQLKAAT DQSARIKILY GGSMNAANAA TLLAQPDIDG GLIGGASLKA PDFLKIIAAA
PV
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