Gene Pnap_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1406 
Symbol 
ID4687791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1491984 
End bp1492775 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content64% 
IMG OID639834408 
Producthypothetical protein 
Protein accessionYP_981641 
Protein GI121604312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.561987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACC CTGCATTCAA CCGCCGCACC TTCTGCGGCA GCGCCCTGGC GCTGGCCCTC 
GCAACTCCGG GCCATGCGCA GGTAAAAAGC CTGGGCGATG CCATCAACAA GGCGGGCCGC
CAGCGCATGC TGTCCCAACG CATGGGCAAG GCCTGGATGA GCCTTGGCCT GGGCATCGAG
GTCGAGTCCG CGCGTCGCGT GCTGGACCAG TCGATGGCGC TGTTTGACCG CCAGTTGACG
GAACTCAAGG CCTTTGCACC CGCAGGCGAT ACGCGCGACA CCTATGTGCA GCTCGAAGCC
GCCTGGTCAG GCTACAAGGC CTTGCTGGTG GGCACGTCCC CCTCGCACAA CCAGGGCAAG
CCGCTGCTGG AGCAGGCCGG CAAGGTTCTG GCGCTGGCGC ACAAGGGCAC CGGGCTTTAC
GAGCAGCAGT CCAGCAAGCC CGGCGCCAAG CTGGTCAACG TGGCCGGCCG CCAGCGCATG
CTGTCGCAGC GCATGGCGCA GTTTTACCTG GCCAACAGCT GGAATGTGGA CACGGCCATC
AGCCAGCGTG AAATGGCCAA GGCCCGGGAA GAATTCATCC CGGCCCTGGA ACTGCTGCGC
AACGCGCCCG AAGCCACCCC GGAGATCAAG CAGACGCTGG CGCTGGCCGA CGGGCAGTGG
ATGTTTTTTA ACAATGCCCT GAAAGCCGGC GCTGGCAGCA GCAAAGCGGC ATCGCATGTA
TTTATTACCA GCGAAAACCT GCTGGAGGTG ATGGACAACG TGACCTCCCA GTACGCACGC
ATTCTTGGAT AA
 
Protein sequence
MTHPAFNRRT FCGSALALAL ATPGHAQVKS LGDAINKAGR QRMLSQRMGK AWMSLGLGIE 
VESARRVLDQ SMALFDRQLT ELKAFAPAGD TRDTYVQLEA AWSGYKALLV GTSPSHNQGK
PLLEQAGKVL ALAHKGTGLY EQQSSKPGAK LVNVAGRQRM LSQRMAQFYL ANSWNVDTAI
SQREMAKARE EFIPALELLR NAPEATPEIK QTLALADGQW MFFNNALKAG AGSSKAASHV
FITSENLLEV MDNVTSQYAR ILG