| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1354 |
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| Symbol | |
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| ID | 4686618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1441308 |
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| End bp | 1442366 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639834357 |
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| Product | porin |
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| Protein accession | YP_981590 |
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| Protein GI | 121604261 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0786529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACCT ACCTGATGAA AAAACGATTG ATCGCTCTGG CTGCCCTGGC TCTGGTGTCT
GGCATGGCAA GTGCGCAAAG TTCCGTGACT GTTTACGGCA ACATCGATAT TGGCGTATTA
ACGCAAAATA ATGCACCAGC CGGCGGTTCA TCGACCAGCA TCGCCAATGG TGGTATTTCG
CCAAGCATCT GGGGGTTTCG CGGTTCGGAA GACCTGGGCG ACGGCCTGAA GGCTACCTTT
AATCTGGAAG GGCATTTTTA CGCGGACACT GGCGCTTCTG ATCCGCGCCT GTTCCGTCGC
CAGTCCAATG TCGGTCTTTC ATCGGCCACA CTCGGTACGC TGACCCTGGG TAATCAATAC
AGCCCCGCCA TTTTGGCATT TGCCGCAACC GACCCGCGCG GCCTGCGCGA AAACTTCTCG
GGCCTGTATC CATGGGCCTA CAACTCGGGC GCATTGACTA CCGGCAATAA CGGCAACAAC
GATGTTGGCG TATTCCTGCA AAATGCAGTT TCCTACAGCA ACAAGTTTGG TCCCGTTGGC
ATTGCAGGTG CTTACAGCAC TTCTGAAACC AAGGGCGCTG TCTATTCCCT GGGTGCTACC
TACACGGGTC CGGTTTCATT GTCTGCTGCG TATCAGGCAA CCAATTTGGC CAATACGTCG
GAACGCGGCA GCACGATTTA TACGGTGGGC GCTGGCTACA CCATGGGCGC ATTCACCGGC
AAGCTCAATT ACCTGCGCGG CACGAACAAG AATGCAGCGC TGGTTGAAAC CAGCAAAGTT
GGCGTGACGG GCGTGGGCGT TGACTGGAAA ACCGCAACCA ACAATACCGT GATGGCCGCT
GCTTATTATG GCAAGGACAA AAAGAACAGC ACCGATAAAA CCACCACGTT TATCCTGAGC
GATGAATATG CCCTGTCCAA GCGCACCACC ATGTACGGCC AGCTCGTGTT TGCCAATGCA
AAATCGGGAG CTACGCTGTT GACGACCATG GTTGCCGGCG GCACGGCGCC CGACAAGACC
ACGACTTTGT TTAATGTGGG CATTAAACAC TCCTTCTGA
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| Protein sequence | METYLMKKRL IALAALALVS GMASAQSSVT VYGNIDIGVL TQNNAPAGGS STSIANGGIS
PSIWGFRGSE DLGDGLKATF NLEGHFYADT GASDPRLFRR QSNVGLSSAT LGTLTLGNQY
SPAILAFAAT DPRGLRENFS GLYPWAYNSG ALTTGNNGNN DVGVFLQNAV SYSNKFGPVG
IAGAYSTSET KGAVYSLGAT YTGPVSLSAA YQATNLANTS ERGSTIYTVG AGYTMGAFTG
KLNYLRGTNK NAALVETSKV GVTGVGVDWK TATNNTVMAA AYYGKDKKNS TDKTTTFILS
DEYALSKRTT MYGQLVFANA KSGATLLTTM VAGGTAPDKT TTLFNVGIKH SF
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