Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1340 |
Symbol | |
ID | 4690223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1430550 |
End bp | 1431125 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639834343 |
Product | hypothetical protein |
Protein accession | YP_981576 |
Protein GI | 121604247 |
COG category | [S] Function unknown |
COG ID | [COG3548] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.217938 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAAG GTCGCCTGGA AGCCTTCAGC GATGGCGTGA TCGCCATCAT CATCACGATC ATGGTGCTGG AGTTGAAGGT GCCGCATGGC ACCGAATGGG AAACGCTGCA CCCGTTGATT CCGGTATTTT TGAGCTATGT GCTGAGCTTT GTTTTTGTCG GCATCTACTG GAACAACCAC CATCACATGC TGCACGCCAC GCGCCAGGTG AATGGCGGCA TTTTGTGGGC CAACCTGCAC TTGCTGTTCT GGCTGTCGCT GATCCCGTTC GTGACCAGCT GGATGGGTGA AAACCATTTC GCGGCCTTGC CGGTGGCCTT GTACGGGACG GTCTTGCTGA TGGCGGCCTG CGCCTATTTC ATTCTTTCCC GCGCCTTGAT TGCATTGCAC GGCAAGGGCT CGCCGCTGGC CCTGGCACTG GGCGGGGACT TCAAAGGCAA GGTGTCTATC CTCGTTTACG CCGTGGCGAT TCCGCTTTCA TTCGTGAATG CCTGGATGGC CATCGCCCTT TACGTGTCCG TGGCATCCAT GTGGCTGCTG CCCGACCGCC GGATCGAAAA CACCCTCGTG CGCTAA
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Protein sequence | MGKGRLEAFS DGVIAIIITI MVLELKVPHG TEWETLHPLI PVFLSYVLSF VFVGIYWNNH HHMLHATRQV NGGILWANLH LLFWLSLIPF VTSWMGENHF AALPVALYGT VLLMAACAYF ILSRALIALH GKGSPLALAL GGDFKGKVSI LVYAVAIPLS FVNAWMAIAL YVSVASMWLL PDRRIENTLV R
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