Gene Pnap_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1340 
Symbol 
ID4690223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1430550 
End bp1431125 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content58% 
IMG OID639834343 
Producthypothetical protein 
Protein accessionYP_981576 
Protein GI121604247 
COG category[S] Function unknown 
COG ID[COG3548] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.217938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAG GTCGCCTGGA AGCCTTCAGC GATGGCGTGA TCGCCATCAT CATCACGATC 
ATGGTGCTGG AGTTGAAGGT GCCGCATGGC ACCGAATGGG AAACGCTGCA CCCGTTGATT
CCGGTATTTT TGAGCTATGT GCTGAGCTTT GTTTTTGTCG GCATCTACTG GAACAACCAC
CATCACATGC TGCACGCCAC GCGCCAGGTG AATGGCGGCA TTTTGTGGGC CAACCTGCAC
TTGCTGTTCT GGCTGTCGCT GATCCCGTTC GTGACCAGCT GGATGGGTGA AAACCATTTC
GCGGCCTTGC CGGTGGCCTT GTACGGGACG GTCTTGCTGA TGGCGGCCTG CGCCTATTTC
ATTCTTTCCC GCGCCTTGAT TGCATTGCAC GGCAAGGGCT CGCCGCTGGC CCTGGCACTG
GGCGGGGACT TCAAAGGCAA GGTGTCTATC CTCGTTTACG CCGTGGCGAT TCCGCTTTCA
TTCGTGAATG CCTGGATGGC CATCGCCCTT TACGTGTCCG TGGCATCCAT GTGGCTGCTG
CCCGACCGCC GGATCGAAAA CACCCTCGTG CGCTAA
 
Protein sequence
MGKGRLEAFS DGVIAIIITI MVLELKVPHG TEWETLHPLI PVFLSYVLSF VFVGIYWNNH 
HHMLHATRQV NGGILWANLH LLFWLSLIPF VTSWMGENHF AALPVALYGT VLLMAACAYF
ILSRALIALH GKGSPLALAL GGDFKGKVSI LVYAVAIPLS FVNAWMAIAL YVSVASMWLL
PDRRIENTLV R