| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1324 |
|---|
| Symbol | |
|---|
| ID | 4686304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1415256 |
|---|
| End bp | 1415843 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639834327 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_981560 |
|---|
| Protein GI | 121604231 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.317374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCA ACCAGCAGAA TCAGCAGAAT CAGCAGAACC AGAACCAGCA GACCGCCCAG
TCCGGCGAGT CCGGTCAGGC AGCGCGCCAG CAGCCCGGCC AGGCGGAGTC GCGGACCGGC
CAGTCGAGCC AGGACAACCG GCAGGGTGAC CCGGGCCGGC AAGCCGGCGG ACAGGCGCAG
CAAGGCGGGC AGGGTGCGCG TGACGTCTTG CCCGTCGCGC AGCAGGGCAG GCAAGCCGCG
CAGACCCCGT CCCGCGCCGC CTTGCTGCCG CCCGTGGACA TTTTTGAAGA TGAAACCGGC
TTTGTCGTCA TCGCCGACAT GCCCGGCGTG GCCAAGGAGC AACTGGTCGT GCGCGTGACC
GGCGACAACC TGCTGATCGA AGGCGCGGCC TCGGTGCCGG CGGTGGCCGG CAACATGGAA
CTGGTGTACG GCGAAGTCCA GACGCTGCAG TACCGGCGCA GTTTCACCCT GAGCCGCGAA
CTCGACCCCG GCAAGATCGA GGCCAAGCTC GCCAACGGCG TGCTGACCCT GCGCATCCCG
AAAGCCGAAG AAGCCCGGCC GCGCCGCATT GAAATCAGCG CCGGCTGA
|
|---|
| Protein sequence | MDTNQQNQQN QQNQNQQTAQ SGESGQAARQ QPGQAESRTG QSSQDNRQGD PGRQAGGQAQ
QGGQGARDVL PVAQQGRQAA QTPSRAALLP PVDIFEDETG FVVIADMPGV AKEQLVVRVT
GDNLLIEGAA SVPAVAGNME LVYGEVQTLQ YRRSFTLSRE LDPGKIEAKL ANGVLTLRIP
KAEEARPRRI EISAG
|
|---|
| |