Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1318 |
Symbol | |
ID | 4686312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1408548 |
End bp | 1410494 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639834321 |
Product | hypothetical protein |
Protein accession | YP_981554 |
Protein GI | 121604225 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.181823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAT TAAATAGCCA GTCCCGCTGC CGCCCCTGGC TGGCTGCCGT GTTGCTGAGT GCCTTGGCCG CCGGATGCGG TGGCGGGCGT GATCCGATCC TGGGTTCAGG CGGCGCGACC GTCGTCCCTC CGGCCGCTGT CCTTGTCGCG CCTGTGGTCA CCGCCGTGGC GCCCGCGCCG GGTTCCACGG GCGTTGCGCT CAACAACACC TTGATCACCG CCGCCTTCAA CGAGCCGGTG TCCATGACGG GCGCAGCCAG TTTTACGCTG AGCTGTGCCG CTCCCTGCGC AAGCCCTGCG GGAGTCGTGG CACTGGATTC GACCCAGCAG CTTGCAACCC TTGCGCTGGC GCCGGCCACC ACGCTGGCAG CGTCCACCAC CTACACGGCC ACGGTCAGCG GGGCGACCAG CCTGGCCAGC GGCCTTGCAT TGGCCAGTCC CTATGTCTGG CGCTTCACCA CCGGCGCCAC AGCCGACACC ACGCGGCCCC GGGTATCGTT CACGGTTCCC GCGACGGCAA ACCCCGGTCC TCTGACCGGC GTGCCCGCCA ACACCGCCAT CAAAGCAGCC TTCACCGAGG CCATGGCCCC CGGCACCATC ACGGCCGCCA GCTTTACCGT GACCTGTGCG GCGCCCTGCG TGTCACCCGC AGGCAGCGTG AGCTATTCCC TGGCCAGCAA GACGGCCATC TTCCGGCCGG CCGCCGCGCT GGCCGTGGGC GCGACCTATA CCGCCACCGT GACGGCTGCA GCGACCGACC TGGCGCGCAA CCAGCTGGCC GGCAACCAGG CGCCATTGCC TGCGGCAAGC AACCATGTGT GGACATTCAC CACCGCCGCG CCGGTTGCGC CCGCCAATGT CTCGGTGCTT TCCACCCAGC CTGCCGCCGG CGCCGCCAAC GTCTGCACGA ACGCCAGCAT CAACGCCAGC TTCAGCGTGC CCTCCGGCTT TGAAATGGAC CCGGCAACCG TCAATGCCGC CACCTTCACC GTGACCGGCC CGGCGCTGGC CCCCGTGGTG GCGGCATCGG TGGTGCTGGA CGATGCCACG GGCCGCGTGG CGACCTTCAC GCCGCTTGCC GCGCTGACCG CCGGGGTCAC GTATTCCGCC GTGGTCAAGG GCGGCGCCAC CGGCGTCAAG GACCTGGCCA TTCCGGGCAA CCCGATGCTC GCCAGCCATG CCTGGAGCTT TACCGCCGTC AATTGCACCG TGCCGCCGGT TCCATCGGCC ATCGTCCTTG GCGCGGCTGC ACCCTTTGCC AGCTACGGCG GCACCGCCGG CATGACCAAC CAGGGCATTG ACACCGTCAT CAATGGCGAC ATCGGCACCA CTGCCGTATC GACCGGCGTG ACCGGCTTTC AGGACACGGC TGGCAATGTG TACACCGTGA CGCCGCTGAA CAAGGGCGTC GTGAACGGCA GCATCTACAC CTATCCGCCC GCTCCCGGCA ATGCCGCCAC CAAAGTGATT GCCGATGCCG CCCTGGCCGC CGCGCAAGTG GCCTACAACC AGCTGGTCGC CATGCCGCCG GGCGCTTATG CCGGCGCGGG CGAGCTGGGT TTGCTGACCC TTGCCCCCGG CACCTACACC TCCGCCACTT CCTACCAGCT GACGCAGGGC GACCTGACGC TGGATGCGCA AGGCGACCCG AATGCAGTCT TCGTCTTCCA GATGGGCAGT TCGCTGACGG TGGGCATTGC CGGACCGACG GGCGCCCGCA GCATCGTGCT TAAAAACGGC GCCCAGGCGA AAAATGTGTT CTGGCAGGTC GGTACATCGG CCACCATCAA TGCGGCGGGT GGCGGTTTCA TGAAGGGAAC CATCATCGCC CAGCAGGCCG TGACCTTCTC GACCGCCGGC AACGCCAAGC TCACGGTGCT CGACGGCCGG GCCTTGAGCC TGATCTCGGG CGTGACCATG GTCAACACGC GCATCAACCT GCCCTGA
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Protein sequence | MKPLNSQSRC RPWLAAVLLS ALAAGCGGGR DPILGSGGAT VVPPAAVLVA PVVTAVAPAP GSTGVALNNT LITAAFNEPV SMTGAASFTL SCAAPCASPA GVVALDSTQQ LATLALAPAT TLAASTTYTA TVSGATSLAS GLALASPYVW RFTTGATADT TRPRVSFTVP ATANPGPLTG VPANTAIKAA FTEAMAPGTI TAASFTVTCA APCVSPAGSV SYSLASKTAI FRPAAALAVG ATYTATVTAA ATDLARNQLA GNQAPLPAAS NHVWTFTTAA PVAPANVSVL STQPAAGAAN VCTNASINAS FSVPSGFEMD PATVNAATFT VTGPALAPVV AASVVLDDAT GRVATFTPLA ALTAGVTYSA VVKGGATGVK DLAIPGNPML ASHAWSFTAV NCTVPPVPSA IVLGAAAPFA SYGGTAGMTN QGIDTVINGD IGTTAVSTGV TGFQDTAGNV YTVTPLNKGV VNGSIYTYPP APGNAATKVI ADAALAAAQV AYNQLVAMPP GAYAGAGELG LLTLAPGTYT SATSYQLTQG DLTLDAQGDP NAVFVFQMGS SLTVGIAGPT GARSIVLKNG AQAKNVFWQV GTSATINAAG GGFMKGTIIA QQAVTFSTAG NAKLTVLDGR ALSLISGVTM VNTRINLP
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