Gene Pnap_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1256 
Symbol 
ID4688323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1349714 
End bp1350340 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content59% 
IMG OID639834259 
Producthypothetical protein 
Protein accessionYP_981492 
Protein GI121604163 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3470] Uncharacterized protein probably involved in high-affinity Fe2+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.609776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCTC TTCGTCACAC CCTCTTGACT TTCGCTCTTG CCGCAGCCTG TGCGGGCGCA 
TGGGCTCAAA CCTCTGCGCA GACCTCTCAA AATAGTCCGA AAAGCGCTGC GGCGCAGCTT
GCCGAGCCCA AGGTCGAGAA GCTCGCCGTT GCGGCCGACC CCTTGAAAAA GGCGGTGCTC
GTCGGCCGTG TCGCGACAGG CAACATGCTG TTTCAACTGG AGCTTGAGGG TTCGGAGCCG
ATGTGGATGC AGATGGGCAA TCCGCCCACT TGGGAGGCAC ACCAACCCGC CGCCGACGAG
CGCTACCACG TCGAGTTAAA GCTGACAGAC CCGAAGAGCA AGACGCGCAT TCCCTACGCA
AACATCAACT TTGCAGCGAC AAACAAGGAA ACCGGCAAGA CCCTCACCTT GCCTTTGCCG
CCGATGTGGG GCAGCAGTGG CCTTCACTAT TCGGCCAACA GCGCGCTTCT GGGGGACGGT
ACCTACGCCG CCACGGTGAC AGCCGATGTC CCGACGTTCC AGCGCGAACT GAAAGACAAA
GATCTGTGGT CCAAACCTGT GAGCGCCAAG TTTCATTTCA AACTTGCGGG TGGAAAATTG
ACGGAAGTCT CGCAGGCCGG CCGCTAA
 
Protein sequence
MLPLRHTLLT FALAAACAGA WAQTSAQTSQ NSPKSAAAQL AEPKVEKLAV AADPLKKAVL 
VGRVATGNML FQLELEGSEP MWMQMGNPPT WEAHQPAADE RYHVELKLTD PKSKTRIPYA
NINFAATNKE TGKTLTLPLP PMWGSSGLHY SANSALLGDG TYAATVTADV PTFQRELKDK
DLWSKPVSAK FHFKLAGGKL TEVSQAGR