Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1256 |
Symbol | |
ID | 4688323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1349714 |
End bp | 1350340 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639834259 |
Product | hypothetical protein |
Protein accession | YP_981492 |
Protein GI | 121604163 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3470] Uncharacterized protein probably involved in high-affinity Fe2+ transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.609776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCTC TTCGTCACAC CCTCTTGACT TTCGCTCTTG CCGCAGCCTG TGCGGGCGCA TGGGCTCAAA CCTCTGCGCA GACCTCTCAA AATAGTCCGA AAAGCGCTGC GGCGCAGCTT GCCGAGCCCA AGGTCGAGAA GCTCGCCGTT GCGGCCGACC CCTTGAAAAA GGCGGTGCTC GTCGGCCGTG TCGCGACAGG CAACATGCTG TTTCAACTGG AGCTTGAGGG TTCGGAGCCG ATGTGGATGC AGATGGGCAA TCCGCCCACT TGGGAGGCAC ACCAACCCGC CGCCGACGAG CGCTACCACG TCGAGTTAAA GCTGACAGAC CCGAAGAGCA AGACGCGCAT TCCCTACGCA AACATCAACT TTGCAGCGAC AAACAAGGAA ACCGGCAAGA CCCTCACCTT GCCTTTGCCG CCGATGTGGG GCAGCAGTGG CCTTCACTAT TCGGCCAACA GCGCGCTTCT GGGGGACGGT ACCTACGCCG CCACGGTGAC AGCCGATGTC CCGACGTTCC AGCGCGAACT GAAAGACAAA GATCTGTGGT CCAAACCTGT GAGCGCCAAG TTTCATTTCA AACTTGCGGG TGGAAAATTG ACGGAAGTCT CGCAGGCCGG CCGCTAA
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Protein sequence | MLPLRHTLLT FALAAACAGA WAQTSAQTSQ NSPKSAAAQL AEPKVEKLAV AADPLKKAVL VGRVATGNML FQLELEGSEP MWMQMGNPPT WEAHQPAADE RYHVELKLTD PKSKTRIPYA NINFAATNKE TGKTLTLPLP PMWGSSGLHY SANSALLGDG TYAATVTADV PTFQRELKDK DLWSKPVSAK FHFKLAGGKL TEVSQAGR
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