Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1209 |
Symbol | |
ID | 4689319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1292126 |
End bp | 1293928 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639834212 |
Product | alkaline phosphatase |
Protein accession | YP_981445 |
Protein GI | 121604116 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.258047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAAG TTACCAGCCG CCGTGAGTTT TTGCTGAAAA CGGCAGCTGC CGTTGTCGCG GGCAGTTCAG TCGTGGCCTG CGGCGGCAGC GACGACAGCA CGCCCGTGCC TCCGGCGCAA TTCACCTATG GCGTGGCCAG CGGCGACCCA CTGTCTGATC GCGTGATCCT GTGGACTTAC GCCAAAGTCG CTGACAGCAA TGCCTCCGTG CCGCTGACCT GGCAAGTGGC CACTGACAGC AGCTTCGCCA ATATCGTCAG CTCCGGCTCG GTCGAGGCGC TGCCGGCCAA CGGCTTCACC GCCAAGGTCG ATGCCACCGG CCTGAGCGCA GGCGCGAGTT ACTTCTATCG CTTTCGCGAT GCGGCCGGAA CCACTTCCAC CGTCGGCGCC ACGCGCACCC TGCCGGCCGC ATCGGTGGCG AGCGTCAAGT TCGCCGTGTT CTCCTGCTCG CTGTACTCGG AAGGCTACTT CAATGCCTAC GCCGATGCCG CCAGGTCAGA CGCGCTGTAT GCCCTTCACC TGGGCGACTA CATCTACGAG TACGGCTCGG ACACGGCCAA ATACGGCAAC AAGGACGCCG TGGCGCTGGG CCGCGTGGCG GCCCCGGCCA GCGACATCGC CAGCCTGGCC GACTACCGCC AGCGCTATGC GCAGTACAAG TCGGATGCCG ATCTGCAGGC CCTGCACGCC AAAATGCCGT GGATCACGAT CTGGGACGAC CACGAATTCG CCAACAATGC CTATAAGGAT GGCGCTGAAA ACCACAACCC GGCCACCCAA GGCGACTGGG CCACGCGCAA GGCCATGGCC GCGAAGGCTT ACCACGAGTG GTTGCCGATC CGCACGGCCG ACACGGCCAA TCTGCTGAAA ATTTACCGCC ACTTCGATTT CGGCAAGCTG CTGTCACTGC ACATGCTCGA CACCCGCATC GAGGGCCGCG ACCGCCAGTA TGACAACTTC GGCGACGCCG ATGGCGGCAT CGGGCGCTAC ATCACGGGTC TGACCCCGGT GGGCGGCGTC CTGCCCGACG CCTCGCGCCG CATTATCAGC ACCGCGCAGC AGGACTGGCT GACCGCTGGC TTGGCCACCT CCACCGCCAC CTGGCAGTTC CTGGGCAACC AGGACATCAT GGCCCGCATG TGGTTTCCGG CGTCGGTGCT GCGCAAGCAG GCGGCCGCCT TCGCCTCGCC ACCAACAGCC ACACTGGCCG ATGTGACAGC CGCCATCAAT GATTACCTGA CCGCCAAGGC CACGCGCGCA GCCGCTGGCC CGGGCGCGCT GACGCCAACC CAGGCCGCCC TGCTCGATCC GGCGATCAAC CCGACCCTGC CCTACAACCT GGATGCCTGG GACGGCTACC CGACCCAGCG CGATGCGATT TTGACCACTG TGAAAAACAT GAACAAGCAA CTGGTGGTGC TGTCGGGCGA CTCGCACAAC GGCTGGTTTA CCCAGCTCAC CACGCTCGCG GGCGTCAAGG CGGGCGTCGA GTTTGCAGGC AGCTCGGTCA GCTCGACCGG ATTCGAGGCC GTCGGCCTGG GCGAACTGGC GTCTTCGCTG GACGGATCGG TGTTGGTGCC GCAACTGGGC ACGGCGGCCA TCGGCGCCGG CCTGGGCCTG GTGGACGACC TAGGCTACGT CGATACGAAG CGCCGGGGCT ACCTCTTGAT GACGGTGACC GCAGCCAGCG TCAAGGGCGA ATATGTGTTC GTCAATACGG TCAAGTCAAA GACCTACACC GCCAGCATCG GCAAAACCAT CACGGTCACC AGCGCGGGCG TCGTCAGCTA CGGCGACGCC TGA
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Protein sequence | MSEVTSRREF LLKTAAAVVA GSSVVACGGS DDSTPVPPAQ FTYGVASGDP LSDRVILWTY AKVADSNASV PLTWQVATDS SFANIVSSGS VEALPANGFT AKVDATGLSA GASYFYRFRD AAGTTSTVGA TRTLPAASVA SVKFAVFSCS LYSEGYFNAY ADAARSDALY ALHLGDYIYE YGSDTAKYGN KDAVALGRVA APASDIASLA DYRQRYAQYK SDADLQALHA KMPWITIWDD HEFANNAYKD GAENHNPATQ GDWATRKAMA AKAYHEWLPI RTADTANLLK IYRHFDFGKL LSLHMLDTRI EGRDRQYDNF GDADGGIGRY ITGLTPVGGV LPDASRRIIS TAQQDWLTAG LATSTATWQF LGNQDIMARM WFPASVLRKQ AAAFASPPTA TLADVTAAIN DYLTAKATRA AAGPGALTPT QAALLDPAIN PTLPYNLDAW DGYPTQRDAI LTTVKNMNKQ LVVLSGDSHN GWFTQLTTLA GVKAGVEFAG SSVSSTGFEA VGLGELASSL DGSVLVPQLG TAAIGAGLGL VDDLGYVDTK RRGYLLMTVT AASVKGEYVF VNTVKSKTYT ASIGKTITVT SAGVVSYGDA
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