| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1142 |
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| Symbol | |
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| ID | 4688808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1213903 |
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| End bp | 1214826 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834146 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_981379 |
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| Protein GI | 121604050 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.987303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCG CATTTTGCAA ACTCCTGCTC AGCGGCATCG CCAGCGCCTG CCTGCTGCCG
GGCGCCAGTT TCGCGGCCGA GCCACTGCCG GTCGTGGCCA GTTTCAGCAT CCTGGGCGAC
CTGGTGCGCG TGGTCGGCGG CGAGCGCGTC AGCGTCACCA CGCTGGTCGG GCCTGACGAG
GACGCGCATG TGTTCGAGCC CAAGCCGGCC GATGCCAGGG CCATCGTGCA AAGCCGGCTG
CTGGTCGTCA ACGGCCTGGG CTTTGAGCCG TGGGCGCAAA AGCTGGCGAA GTCCGCCGGC
TACAAGGGCG AAACCGTGGT GGCGTCGCAG GGCGTGAAGT CGCGCGCCAT GGCCGCAGAA
AAAGGCCATG ATGAAAAGGG CCATCAGCAT GAGGAAACCG ATCCCCACGC CTGGCAAAAC
CCCGACAACG TCGCGCTGTA CGCGCGCAAC ATCGCCGCCG CTCTCGCCAA GGCCGATCCC
GCAGGCGCTA CCCTTTACCA GGCCAACGCC AGCGCCTACG TGAAGGAGCT GCAAACCCTC
GACGCCTGGG CCAAGGCACA GTTCGCCACC TTGCCCGCCG CCAGGCGCAA GGTCATCACC
TCGCACGATG CATTCGGCTA CTTCGCGGCG CAGTACCAGG TCAAATTCCT GGCGCCCCAG
GGCGTTTCGA CCGACGCCGA ACCGAGCGCC AAGGAGGTGG CGCAGCTCAT CAGGCAAATC
CAGCGCGAAA AGATCAGGGC CGTGTTCGTC GAAAACATGA GCAACCCCAA GCTGCTGGCG
CAATTGAGCA AGGATGCGGG CGTGAGCGCC GGGCCTGCGC TGTATGTGGA TGCGCTGTCG
GCCGCAGGCG GCCCCGCCGA CAGCTACCTC AAGCTGATGC GCCACAACGT GACGCAACTG
GTGCGCGGGA TGCAGGCCAA CTGA
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| Protein sequence | MKRAFCKLLL SGIASACLLP GASFAAEPLP VVASFSILGD LVRVVGGERV SVTTLVGPDE
DAHVFEPKPA DARAIVQSRL LVVNGLGFEP WAQKLAKSAG YKGETVVASQ GVKSRAMAAE
KGHDEKGHQH EETDPHAWQN PDNVALYARN IAAALAKADP AGATLYQANA SAYVKELQTL
DAWAKAQFAT LPAARRKVIT SHDAFGYFAA QYQVKFLAPQ GVSTDAEPSA KEVAQLIRQI
QREKIRAVFV ENMSNPKLLA QLSKDAGVSA GPALYVDALS AAGGPADSYL KLMRHNVTQL
VRGMQAN
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