| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1140 |
|---|
| Symbol | |
|---|
| ID | 4688227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1212035 |
|---|
| End bp | 1213084 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639834144 |
|---|
| Product | putative ATP-binding protein |
|---|
| Protein accession | YP_981377 |
|---|
| Protein GI | 121604048 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1106] Predicted ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.49556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGACA AAATGCATAT CAAAAACCTG ACTGTTTTCT CCGATGTCAA GCTGAAATTT
GGGCAAAACC TGAACGTGAT CGTAGGCGAG AACGGCGCGG GAAAAACACA TCTATTGAAA
ATGGCTTACT GCGCCATGGC CACGAGTTGG GAAGAAGGAC GCAAACCCAA CGCATCGCCA
CCCACGAAAA CCTTGCTTCA AAGCCGTCTG GCCGACAAGC TGGTGAATGT GTTTCGCCCA
GAAGCATTAG GACGCTTGGC CAAACGCAAG CAAGGGCGTG AGCGTTGCGA CATTCAGTTG
AGCTACTTTC GGCCAGAGCT TGACATTGCG TTTAGCTTCG CCACCAACAG CAAGTCCGAG
GTAAGCATCA GCACGCTGCC CGAGAAATGG CTTGATGCGG CGGCAGCCTA TCTGCCTACC
CGGGAACTTT TGACGATTTA CCCTAACTTT GTAGCCATCT ATGAAGGTCA CTACCTGGAA
TTCGAGGAAA CCTGGCGAGA TACCTGTTTG CTGCTCGGCA CACCCCTCCA AAAAGGCCCA
ACGGAAACAC GTATCCGAGA GTTGTTAAAG CCTCTGGAAG ATGCCATGCA GGGCAGTATT
GAATTGGACA AGAACGGCCG GTTTTACCTG AACAATGGCA GTGGGCGGAT GGAAATGCCT
TTGGTTGCGG AGGGGTTGCG AAAACTCGGC ATGCTGTCCA GGCTGATTGC GACCGGCGCA
CTTTTGAACA AGGGCTGCCT GTTTTGGGAC GAGCCGGAGG CCAACCTCAA TCCACGCCTG
ATCAGGCAAC TGGCTAGCAC CATTGTTGAA TTAAGCTGTG GCGGCATTCA GGTATTTATT
GCCACCCATA GCCTGTTTTT ACTGCGCGAA ATAGAAATCG TCCTTTCAGC CCGCACATCG
CAGCAACCTG ACACGCAGTT TTTTGGACTG CATGCGGATG CCGATGGTGT GTCGCTCATG
CAGGGGCCGA CGATTGACGA TATTGGCGAC ATTGCAGCCC TGGATGAAAG CTTGCTGCAG
TCTGATCGCT ATCTCGCCAT GGTGAACTGA
|
|---|
| Protein sequence | MLDKMHIKNL TVFSDVKLKF GQNLNVIVGE NGAGKTHLLK MAYCAMATSW EEGRKPNASP
PTKTLLQSRL ADKLVNVFRP EALGRLAKRK QGRERCDIQL SYFRPELDIA FSFATNSKSE
VSISTLPEKW LDAAAAYLPT RELLTIYPNF VAIYEGHYLE FEETWRDTCL LLGTPLQKGP
TETRIRELLK PLEDAMQGSI ELDKNGRFYL NNGSGRMEMP LVAEGLRKLG MLSRLIATGA
LLNKGCLFWD EPEANLNPRL IRQLASTIVE LSCGGIQVFI ATHSLFLLRE IEIVLSARTS
QQPDTQFFGL HADADGVSLM QGPTIDDIGD IAALDESLLQ SDRYLAMVN
|
|---|
| |