| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1113 |
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| Symbol | |
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| ID | 4687438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1187958 |
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| End bp | 1188752 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639834117 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_981350 |
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| Protein GI | 121604021 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGTG CGTCCCCAAC GATTCTTGTG ACCGGCGCGA CCGGCGGCAT TGGACTGGCC
GTCTGCCACC GGCTGGCCAA AGCGGGGAAC TCCCTGCTTC TTGCGGCCCG CGATGCCAGC
CGGCTTCAGT CGCTTTGCGC TGAACTGTCG AACACCTGCC CCGGCGCCTT CTCATGGATT
GGCGTGGACA TGACGCGCGA TGACTCGGTG AAGAGATTTG CCGAGGAACT GAGCGCCAGA
AACCTGATCC TGGACGGTGC CGTCCTGATG CCGCCCCAGG AGCCGCCGAC GAACGACCCC
CTGCCCAGCA GCGAGCGGTG GCGCGAGATT CTTCAAAACA GTTTTGTCGG TCCACTGTCG
CTGCTCAAGG CCGCCATCGC GCGCATGCAG CCTGATCCGG CGCAGGGGCG CAGGGCCAAG
ATCGTCATCA TTTCCGGCAT CTCCTCCGCG CAGGTCATGG GCCACTACGC GTCAAGCAAC
GTGATTCGCT GCGCCTGGCT GGCCGAAGCC AAGACGCTCG CGTTCGCGTT CGGCGAGCAG
GGGATTCACG TCAACACGCT GTCGCTGGGC GGAACGCTCA CGCCGGGCTA TAGCGCGTCG
CTTGAAAAAC GCGCCGCCGG GGCGGGGATG ACGGTGGCGC AACGCATGAA TGAAGAGACC
TCGAACATTC CCCTGAGGAA GTACGGCACC CCCGATGAGG TGGCCGCTGC GGTCGAAGGA
TTGCTGTCGG CGTTCTCCGA CCACATGACC GGGCTCAACA TCCTTCACGA CGGCGGATTC
ACCAGAAGCT ATTGA
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| Protein sequence | MPSASPTILV TGATGGIGLA VCHRLAKAGN SLLLAARDAS RLQSLCAELS NTCPGAFSWI
GVDMTRDDSV KRFAEELSAR NLILDGAVLM PPQEPPTNDP LPSSERWREI LQNSFVGPLS
LLKAAIARMQ PDPAQGRRAK IVIISGISSA QVMGHYASSN VIRCAWLAEA KTLAFAFGEQ
GIHVNTLSLG GTLTPGYSAS LEKRAAGAGM TVAQRMNEET SNIPLRKYGT PDEVAAAVEG
LLSAFSDHMT GLNILHDGGF TRSY
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