| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1032 |
|---|
| Symbol | |
|---|
| ID | 4689918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1091655 |
|---|
| End bp | 1092281 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639834031 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_981270 |
|---|
| Protein GI | 121603941 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.507472 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.696143 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC CCCCCAACCC CCTCGACCAG ATCGCCGCCC AGACGCTGGC GCATTACGAA
CACCATGCCG AAGAGTTCTG GCAAGGCACG CGCGGCCATG ACGTGAGCCA GAACATCGCC
GCGCTGCTGG AACACATCGA GGCGACGCCG CCGTTTGAAC TGCTCGACTT CGGCTGCGGA
CCTGGGCGCG ACCTGAAGAC CTTCAAGGAA CTCGGCCACC GCCCCACCGG GCTGGAAGGC
TCGGCGCGGC TGGCGGCGAT GGCGCGCGAC TACAGCGGCT GTCCGGTGCT GGAGCAAAAC
TTCCTCGAAC TCGACCTGCC CGACGCGCAC TTCGACGGCG TGTTTGCCAA CGCCGCGCTG
TTCCACGTTC CCAGCCTGGC CCTGCCGCGC GTCCTCGGGC AACTGCATGC CACCTTGAGG
CCGGGCGGCG TCCTGTTCAG CTCCAACCCC CGGGGCGACG GCCAGGAAGG CTGGAACGGC
GAGCGCTACG GCGTCTTTCA TGACTGGCCG GCCTGGCGCG ATTACCTGCT GGCCGCAGGA
TTCGCCGAAC TGACGCACTA TTACCGCCCC GCCGGCCTGC CGCTGGCCCA GCAGCCCTGG
CTGGCCAGCG TGTGGCGCAA GCGCTGA
|
|---|
| Protein sequence | MTTPPNPLDQ IAAQTLAHYE HHAEEFWQGT RGHDVSQNIA ALLEHIEATP PFELLDFGCG
PGRDLKTFKE LGHRPTGLEG SARLAAMARD YSGCPVLEQN FLELDLPDAH FDGVFANAAL
FHVPSLALPR VLGQLHATLR PGGVLFSSNP RGDGQEGWNG ERYGVFHDWP AWRDYLLAAG
FAELTHYYRP AGLPLAQQPW LASVWRKR
|
|---|
| |