| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1020 |
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| Symbol | |
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| ID | 4686194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1078630 |
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| End bp | 1079748 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834019 |
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| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
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| Protein accession | YP_981258 |
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| Protein GI | 121603929 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.168014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.586617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCTGA ACGCTGAAGA TTTTCGCTGC CAGGCCCGCC GGGCGCTGCC CCGGTTTGTC
TTTGACTATA TCGATGGCGC GGCCGATGAC GGTGCCTGCC GGCAGCGCAA CCAGGCTGAT
TTCGCGGCGC TGACGCTGTT GCCCCGGGTC TTGCGCGACA CCAGCCAGAT CGACACCACG
GTCACCGTTT TCGGAAGCCC CTGGTCCGTG CCGTTTGGCG TTGCGCCAAC AGGGCTGAAT
GGCCTGATAC GCCCGGGCGG CGATGCCTTG CTGGCAGCAG CAGCAGCCCG GGCAGGCATC
CCTTTCGCGC TATCGACCGC CTCCAACATG CCGCTTGAAG CCGTGCGTGC CGCTGCGCCG
GAGGGTTTGC AGTGGATGCA GCTGTATGTG ATGCACCGGG AGATGGCCGA ACGCATCGTG
CAACGCGCCC GGCGCGCAGG CTACCAGGCG CTGGTGTTGA CCGTGGATGT CCCCGTCAGC
GGCAACCGCG AGCTGGACCT GCGCAACGGG TTTCGCATGC CCTTCAAGCC CACGCCCCAG
ATCGCCTGGG AAGCACTCAC CCATCCGCGC TGGTCGCTGC GAATGGCCCG AAGCGGCACG
CCCGACTTTG CGAATCTCAC GGTCGCCGGC GAAGATGCCG GCTCCGCCAG CTTGCAGGCC
GCGCTTATGG CCCGGGCGAT GGACCGCTCG CTCGTCTGGG AAACGCTGGG CTGGCTTCGC
AAGTCCTGGC CCGGCCCCTT GCTACTCAAG GGGCTGTTGC ATCCTGAAGA TGCACGGCTG
GCGGTGGAGC ATGGCATTGA CGGCCTCATC GTGTCCAACC ACGGAGGCCG GCAACTCGAC
GCCGCACCGT CCGCCATTCA CGCCCTTCCC GCCGTGGTGG CGAGTGTGCA GGGCAGGATT
CCGGTGTTCA TGGACAGCGG CGTGCGGCGC GGCAGCGACA TTGCCAAAGC CATCGCCCTG
GGTGCCAAGG CGGTTTTTCT GGGCCGTCCG CTGCTGTACG GCCTGGCGGC ACAAGGGGCG
GCCGGTATCG ACGCTGTGAT GAAGCAGTTC AGCGATGAAC TGGTACGAAC CATGATTCTG
CTGGGCGCCA GCCGGATTGC CGATTTAAGT GCTGCTTGA
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| Protein sequence | MLLNAEDFRC QARRALPRFV FDYIDGAADD GACRQRNQAD FAALTLLPRV LRDTSQIDTT
VTVFGSPWSV PFGVAPTGLN GLIRPGGDAL LAAAAARAGI PFALSTASNM PLEAVRAAAP
EGLQWMQLYV MHREMAERIV QRARRAGYQA LVLTVDVPVS GNRELDLRNG FRMPFKPTPQ
IAWEALTHPR WSLRMARSGT PDFANLTVAG EDAGSASLQA ALMARAMDRS LVWETLGWLR
KSWPGPLLLK GLLHPEDARL AVEHGIDGLI VSNHGGRQLD AAPSAIHALP AVVASVQGRI
PVFMDSGVRR GSDIAKAIAL GAKAVFLGRP LLYGLAAQGA AGIDAVMKQF SDELVRTMIL
LGASRIADLS AA
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