| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0984 |
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| Symbol | |
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| ID | 4687731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1034639 |
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| End bp | 1036960 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639833983 |
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| Product | DEAD_2 domain-containing protein |
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| Protein accession | YP_981222 |
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| Protein GI | 121603893 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCTATG TCGTCGCCGT CAGGGCCTTG TGCGAGTTCA CCGCCAAGCA GGGCGACCTG
GACCTGCGCT TCACGCCCTC GCCTTCGGCC CAGGAAGGCA TCGCCGGCCA TGCGCTGGTG
GCGTCGCGCC GCAGCAAGAG TTACCAGCCC GAACTCAGCC TGAGCGGCGA CTACCAGGAG
CTGCGGGTGC GCGGCCGGGC CGATGGCTAC GACCCGGACA AGAACCAGCT CGAAGAAGTC
AAGACCTTCC GGGGCGACCT GGCGGCCATG CCCGACAACC ACCGGCAACT GCACTGGGCG
CAGGTGAAGA TTTACGGCTG GCTGCTGTGC CAGAAGCTCG AACTGCCCGA GGTTCGGCTG
GCGCTGGTGT ATCTTGATAT CGGCAGCCAT GAGGAAACGC TGCTGACCGA ACGCATGAGC
GCCGATGCGC TCAGGGATTT TTTTGAAGCG CAGTGCGAAA AATTCCTCGG CTGGGCGCGG
CAGGAACTGG CCCACCGCGC GGCGCGCGAT GCGGCGCTGC AGGCGCTGGC TTTCCCGCAC
GCCGCCTTCC GGCCCGGCCA GCGCGACCTG GCCGAAGCCG TGTACCGGTC CGCCGCCAGC
GGCCGCAGCC TGATGGCCCA GGCGCCGACC GGCATCGGCA AGACCATCGG CACGGTCTTT
GCGCTGCTGA AGGCCGCGCC CCGGCAGGAA CTCGACAAGG TGTTTTTTCT GGCGGCCAAG
ACCCCGGGCC GCCGGCTCGC GCTCGATGCG CTGGCATTGA TCCAGCAAAG CGCGCCGGCG
CTGCCCCTGC GCGTGGTCGA ACTGGTGGCG CGCGACAAGG CTTGCCTGCA CCTGGACAAG
GCCTGCCACG GCGATTCGTG CCCGCTGGCC CAGGGCTTTT ATGACCGCCT GCCGCAGGCG
CGCAGTGCCG CGCTGGCAGA CCCACGGGCC AGCCGGCAGG GCAAGGAGGC GCTGCGCGAG
GTGGCCCTGG CGCATGGCGT GTGCCCCTAC TACCTGAGCC AGGACCTGGT GCGCTGGAGC
GATGTGGTGG TCGGCGACTA CAACTATTAC TTTGACGTGA GCGCCCTGCT GCATGCGCTG
ACGGTGGGCA ACCAGTGGCG CGTCAGCGTG CTGGTCGATG AAGCGCACAA CCTGGTGGAC
CGGGCGCGCA AGATGTATTC GGCCGAACTC GACCAGGCCG AACTGGCGGG GGTGCGGCAC
GCTGCGGCGC CCGCGCTGCG AAAGCCGCTC GACCGCCTGC ACCGCGTCTG GCGCGATGTG
CAGAAAGACC CGCAGCACGA TCCGCAGGCG GCTTACCAGG TGCGGCCCGA TCCGCCCGAC
AAATTCCTGC TGGCGCTGCA ACAGGCCACC AGCGCCATCA CCGACGACAT CGAGGCGCAT
CCGACGCGCG TGGACGCGGC GCTTCAGCGC TTTTATTTCG ATGCGCTGCA TTTCTCGCGC
ATGGCCGAGA GCTTTGGCGG CCATTCGCTG TTTGACATCA CGCAGGATGC CGCTGCGGGC
GGGCCGGCCC ACGCCAGGGG CAGCCGCGCT TGGTCCCGGC TGTGCATCCG CAATGTGGTG
CCGGCGCCGT TCCTGGCGCC GCGCTTTGCC GCCGCCCGCT CGGTGGCGCT GTTTTCAGCC
ACGCTGAGCC CGCAAAACTA TTACGCCGAC CTGCTCGGGC TGCCCGCCGA CACGGCCTGG
GTCGATGTGC AGTCGCCCTT CATGGCCGAG CAGCTGGCGG TGCGGGTGGT CAGCGACATC
TCCACCCGCT ACCAGCACCG CGCGCTGTCG CTGCAGCCCA TCGCGGATCT GATGGCGCGG
CAATACGCTG AAAAGCCGGG CAATTACCTG GTGTTCCTGA GCAGCTACGA CTACCTGGAA
AAACTGGCGG AATGCTTCAG GCAGCGTTAC CCGCTGATCC CGATGTGGGA ACAGACGCGG
CGCATGGACG AGGCGGCGCG CGATGAATTC CTGGCGCGCT TCACGGCGCA AACCCAGGGC
ATCGGCTTTG CCGTGCTGGG CGGCTCGTTT GCCGAGGGCA TCGACCTGCC CGGCGACCGG
CTGATCGGCG CCTTCATTGC CACGCTGGGC CTGCCGCAGG TCAACCCGGT CAATGAGCAA
ATCAAGCTAC GCATGGCCGA GAATTTTGGG GCCAGCCAGG CTTATGACTA CAGCTACCTG
TACCCGGGCG TGCAAAAAGT GGTCCAGGCC GCCGGCCGGG TGATCCGCAG CAACTCGGAT
CGCGGCGTGA TCTACCTGAT GGACGACCGC TTTGCCCGGC CAGAGGTCAG GCGCCTGCTG
CCACGCTGGT GGCGGGTCGG GCAGATTCGC GTTTTCAAGT GA
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| Protein sequence | MSYVVAVRAL CEFTAKQGDL DLRFTPSPSA QEGIAGHALV ASRRSKSYQP ELSLSGDYQE
LRVRGRADGY DPDKNQLEEV KTFRGDLAAM PDNHRQLHWA QVKIYGWLLC QKLELPEVRL
ALVYLDIGSH EETLLTERMS ADALRDFFEA QCEKFLGWAR QELAHRAARD AALQALAFPH
AAFRPGQRDL AEAVYRSAAS GRSLMAQAPT GIGKTIGTVF ALLKAAPRQE LDKVFFLAAK
TPGRRLALDA LALIQQSAPA LPLRVVELVA RDKACLHLDK ACHGDSCPLA QGFYDRLPQA
RSAALADPRA SRQGKEALRE VALAHGVCPY YLSQDLVRWS DVVVGDYNYY FDVSALLHAL
TVGNQWRVSV LVDEAHNLVD RARKMYSAEL DQAELAGVRH AAAPALRKPL DRLHRVWRDV
QKDPQHDPQA AYQVRPDPPD KFLLALQQAT SAITDDIEAH PTRVDAALQR FYFDALHFSR
MAESFGGHSL FDITQDAAAG GPAHARGSRA WSRLCIRNVV PAPFLAPRFA AARSVALFSA
TLSPQNYYAD LLGLPADTAW VDVQSPFMAE QLAVRVVSDI STRYQHRALS LQPIADLMAR
QYAEKPGNYL VFLSSYDYLE KLAECFRQRY PLIPMWEQTR RMDEAARDEF LARFTAQTQG
IGFAVLGGSF AEGIDLPGDR LIGAFIATLG LPQVNPVNEQ IKLRMAENFG ASQAYDYSYL
YPGVQKVVQA AGRVIRSNSD RGVIYLMDDR FARPEVRRLL PRWWRVGQIR VFK
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