Gene Pnap_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0901 
Symbol 
ID4688908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp951999 
End bp952511 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content56% 
IMG OID639833898 
Productputative lipoprotein 
Protein accessionYP_981139 
Protein GI121603810 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.795029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACTTCA CCGAACGACT GCGCCGCTAT CTTCTTCACA CCTGCTTGTT TGCTACTTTT 
TTAATAGCTG GTTGTGCCCA TCCAACAAGC GTAAAAGCAC TAAAAGATAT AAAAAAAGAG
TTATGGACAG GGCGCATCAG CCTGTTGGTG AAAAGTGAGC CCGAGCAATC CTTCTCTGCC
GGTTTTGAGC TTAAGGGCAG GTCCGAGCGC GGTGAGTTGA CCCTGATCAG TCCGCTGGGA
AATGTGCTTG GCGTTCTGCG CTGGTCACCG GGCGAAGCGG AACTGGATTC AGGAAACCAG
AAAATTCAGC GCTTTGACTC CGTCGATGCC CTGATGGCGC AAGCCACGGG CGCTGCAGTG
CCGCTGAGTG CGCTGTTTGC CTGGCTGCAG GGTGACGACG CGAATGTCAG CGGCTGGTCT
GCCGACCTGT CGCGGCAAGG CGAAGGCCGG ATTTCTGCCA GAAGAACGCA ACCCGCGCCC
CAGGCTGATC TTCGTGTCGT GCTGGATCAA TAA
 
Protein sequence
MHFTERLRRY LLHTCLFATF LIAGCAHPTS VKALKDIKKE LWTGRISLLV KSEPEQSFSA 
GFELKGRSER GELTLISPLG NVLGVLRWSP GEAELDSGNQ KIQRFDSVDA LMAQATGAAV
PLSALFAWLQ GDDANVSGWS ADLSRQGEGR ISARRTQPAP QADLRVVLDQ