Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0901 |
Symbol | |
ID | 4688908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 951999 |
End bp | 952511 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639833898 |
Product | putative lipoprotein |
Protein accession | YP_981139 |
Protein GI | 121603810 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.795029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCACTTCA CCGAACGACT GCGCCGCTAT CTTCTTCACA CCTGCTTGTT TGCTACTTTT TTAATAGCTG GTTGTGCCCA TCCAACAAGC GTAAAAGCAC TAAAAGATAT AAAAAAAGAG TTATGGACAG GGCGCATCAG CCTGTTGGTG AAAAGTGAGC CCGAGCAATC CTTCTCTGCC GGTTTTGAGC TTAAGGGCAG GTCCGAGCGC GGTGAGTTGA CCCTGATCAG TCCGCTGGGA AATGTGCTTG GCGTTCTGCG CTGGTCACCG GGCGAAGCGG AACTGGATTC AGGAAACCAG AAAATTCAGC GCTTTGACTC CGTCGATGCC CTGATGGCGC AAGCCACGGG CGCTGCAGTG CCGCTGAGTG CGCTGTTTGC CTGGCTGCAG GGTGACGACG CGAATGTCAG CGGCTGGTCT GCCGACCTGT CGCGGCAAGG CGAAGGCCGG ATTTCTGCCA GAAGAACGCA ACCCGCGCCC CAGGCTGATC TTCGTGTCGT GCTGGATCAA TAA
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Protein sequence | MHFTERLRRY LLHTCLFATF LIAGCAHPTS VKALKDIKKE LWTGRISLLV KSEPEQSFSA GFELKGRSER GELTLISPLG NVLGVLRWSP GEAELDSGNQ KIQRFDSVDA LMAQATGAAV PLSALFAWLQ GDDANVSGWS ADLSRQGEGR ISARRTQPAP QADLRVVLDQ
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