Gene Pnap_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0870 
Symbol 
ID4688145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp923909 
End bp924550 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content67% 
IMG OID639833866 
Producthypothetical protein 
Protein accessionYP_981108 
Protein GI121603779 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCTG ACATTCAATC CTGGGGAGAA ACACTGCGCC TGCTGGTCGA GCTGGCCGGC 
ACGGCTGCCT TTGCCTTGTC GGGCCTGCTC GAAGCGGCGC GCAAACGGCT GGACGCCGTC
GGGGTTTGCG TGGTGGCCTG TGTGACGGCC TTCGGTGGCG GCACGCTGCG CGACCTGCTG
CTGGACCGGC GGCCGTTTTT CTGGGTCCAG CATGTCGAGC TGCTCTGGGG CGTGATGGCG
CTGTGCGTGC TGGTGATGCT GTTCATGCGC CAGCGGCATT TCGAAGTGAC CGAGAAGGCG
ATCCAGTGGC CCGATGCGCT GGGGCTGGGC CTGTTCACCG CCACCGGCGT TCACCTGGCG
CTCAATGAGC AGATGCCGAT GCTGGTCGCC GTGCTGATGG GCGTGACGAC CGGCGTGTTC
GGCGGCGTGC TGCGCGATGT GGTCTGCAAT GAAGTGCCCA CGGCCTTTCG TGACCACCGG
CCGTATGCGG TCTGCGCATT TGCCGGCGGC TGGATTTACG CCGGGCTTGG GCTGCTTGAC
GCGCCGGGCT GGGTGGCGCT GGTGGCCTGC GTCGTCGTGA CCGCAGGCCT GCGCCTCATG
GCGCTGTGGC GCAACTGGGA ACTGCCTGCC TGGCGGGTTT GA
 
Protein sequence
MLADIQSWGE TLRLLVELAG TAAFALSGLL EAARKRLDAV GVCVVACVTA FGGGTLRDLL 
LDRRPFFWVQ HVELLWGVMA LCVLVMLFMR QRHFEVTEKA IQWPDALGLG LFTATGVHLA
LNEQMPMLVA VLMGVTTGVF GGVLRDVVCN EVPTAFRDHR PYAVCAFAGG WIYAGLGLLD
APGWVALVAC VVVTAGLRLM ALWRNWELPA WRV