Gene Pnap_0845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0845 
Symbol 
ID4687432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp893581 
End bp894753 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content66% 
IMG OID639833840 
Productcitrate synthase 
Protein accessionYP_981083 
Protein GI121603754 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.627781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCT GGATTTCGAT GGACGAGGCG TGCTGCCTTC TTGGCGTGCG GCCTCAGACG 
GTTTACGCCT ACGTGAGCCG TGGCAAGCTG GAGGTCATGC CCGACCCGGC CGACACACGC
CGCAGCCTGT ACCGCGCCGA GGACGTTGCC GGCCTGGCCA AACGCAAACA GGCCGGCCGC
AAACACGAGA CCCTGGCCGC CAACACGCTG TTCGGCTCGG AGCCCAGCAT CCCGACGGCC
CTGTGCGCGT TCTTTCGCGG GCGCCCGTAT TACCGGGGCC AGGATGCGGT GAATCTGGCC
CGGTCAGCTA CCCTGGAAGA GGTGGCTCAA CTTTTGTGGG GCGCCGAGCA AGCCGTCGAT
TTTTCTTCCT CTGCGTCATC CATGCCGATG CGCTCGGGCA AGCCTGGGCG CGTCGCGGCT
TTCACGGGCT TGGCCGCCCT GGCGGCCGAC GGACATTCCA CCCGCGGACG CTTGATCCGG
GTGCTGCACA ACGAAGGCCA GTGTCTGGTG GGTCAGTTGG CCATTTCGTT CGGTGCCCAG
CCGGGGTGCG AGCCGCTGCA TCTGCGCTTT GCGCAAGGCT GGAAACAATC GACCCAGGTG
GCCGATTTGC TGCGAACGGC CATGGTGCTG CTGGTCGATC ACGAATTGAC CAGTTCAGCA
TTTGTCGCGC GCATTGCGGC CTCGACAGGC GCCTCGTTGC CGGCCTGCCT TCTGGCCGGA
TTGAGCACCC TCTCGGGTCC CTTGCATGGC GATGCCTCGG GCCGCGTCCA GGCGCTGTTC
AGCGAAGTGG AACGGCTGGG CGAAGACCAG GTGGTGGCCC ATTACCTGTC CACCGGCTTG
CCCTTGGCAG GATTTGGCCA TCACCTGTAT CCCGATGGCG ATCCGCGCGC GGCCGCCTTG
CTGGCCTTGT TCGAGCCCCC GGAGGTGATC GCGCGCTTCA TCCAGAAGGT GACGACGCTG
ACCGGCTTGC AGCCCAACAT CGACGTGGCC CTGGCCGCCC TGGTGGCGCA CCACCGCCTG
CCCGTTGATG CCGCTTTTGG CCTCTTCGCA ACGGCGCGAA GCATTGGACT GCTGGCGCAC
AGCCTGGAAC AACTGGGCGT GGCGCAAGTG ATCCGCCCGC GCGGGCGCTA TGTGGGCCAG
GCGCCTGACA TGACGCAGGC CGCCCGCACT TAG
 
Protein sequence
MASWISMDEA CCLLGVRPQT VYAYVSRGKL EVMPDPADTR RSLYRAEDVA GLAKRKQAGR 
KHETLAANTL FGSEPSIPTA LCAFFRGRPY YRGQDAVNLA RSATLEEVAQ LLWGAEQAVD
FSSSASSMPM RSGKPGRVAA FTGLAALAAD GHSTRGRLIR VLHNEGQCLV GQLAISFGAQ
PGCEPLHLRF AQGWKQSTQV ADLLRTAMVL LVDHELTSSA FVARIAASTG ASLPACLLAG
LSTLSGPLHG DASGRVQALF SEVERLGEDQ VVAHYLSTGL PLAGFGHHLY PDGDPRAAAL
LALFEPPEVI ARFIQKVTTL TGLQPNIDVA LAALVAHHRL PVDAAFGLFA TARSIGLLAH
SLEQLGVAQV IRPRGRYVGQ APDMTQAART