| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0821 |
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| Symbol | |
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| ID | 4686386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 867529 |
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| End bp | 868074 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639833818 |
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| Product | putative sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_981061 |
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| Protein GI | 121603732 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTAC CGCTTCAACT GACCTTCAAG GGCATGGATG CTTCAGCCGC CGTCGAGGAG
GCCGCGCACC GCAAGGTGCT GCACCTGGAA CGCTTTTACA GCGGCATCAC CTCCTGCCGC
GTCGTCATCG AACTGCTGCA AAAGCACCAG CACCAGGGCC GGCCGTTCGG CGTGCGGATT
GACCTGACCT TGCCGGGCCA TGAACTGGTG GTGAACCAGG TGGAGCATGA AGACCTGTAC
GTCGCCCTGC GCGACGCCTT CGACGACATG ACGCGCCAGC TCGAAGAACT CGCCCGGCGC
CAGCGCGGCA TGGAAAAAGA GCATCCGCAC GCCTTGCACG GCGAGGTGGT TCGCCTGGAC
CACGACGGCG GCTTCGGCTT CATCAGCACG CCCGACGGGG ACGAGTATTA CTTCAACCAC
GACAACCTGG CCAATACGCG CTTCGACCAG TTGCGCATCG GCTGCCCGGT CCAGTTCATC
GCGCAGGCCG GTGCGCAAGG GCCGCAGGCC AAGCGCGTGA GCGTGGGCAA GCACAGTTTC
GGCTGA
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| Protein sequence | MKLPLQLTFK GMDASAAVEE AAHRKVLHLE RFYSGITSCR VVIELLQKHQ HQGRPFGVRI
DLTLPGHELV VNQVEHEDLY VALRDAFDDM TRQLEELARR QRGMEKEHPH ALHGEVVRLD
HDGGFGFIST PDGDEYYFNH DNLANTRFDQ LRIGCPVQFI AQAGAQGPQA KRVSVGKHSF
G
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