Gene Pnap_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0807 
Symbol 
ID4689469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp850962 
End bp851555 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content62% 
IMG OID639833804 
ProductMarR family transcriptional regulator 
Protein accessionYP_981047 
Protein GI121603718 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCC CCGGCTATGA TGGCGGTTCC ACCCTCATCC GGCCTTATTT GTCAGGCACC 
ATGGCCGAAA AATCGATCAC CCAAGCACTG CGCAACCCGA CCCCTGTCCG CCAGCCAGCG
CGGGCAGCGA AGGCGCCCGT TCAGGCCAGC GAGGCCGCAG ATCGGATGGA CACGTCCTTT
CTGGAAACCC TGATCGGTTA TAACGCCCGC CGCGCCGCGC TTGTGGTGAT TGCAGAATTC
TTGCCGCGAA TGGCGCAATT CGGCCTGCGT CCGGTCGAGT TTTCGGTCCT CACGCTCATC
GGCCACAACC CGGGAATCAC TTCACGCCAG TTGTGCGCCA CCCTGGACAT CCTGCCGCCC
AACCTGGTCG GCATGATCAA GCACCTGGAA AAGCTCGGCA TGCTGGAAAA GCGCGATCAC
CCGACCGACC GCCGCGCGCA AGGCCTGCAT CTGACCGAAA CGGGCAAGGC CACGCTCCCA
TTGGCCGAGC AGACGGCCAG TGCGATTGAA ATTGATGCCA CCTCGCGCTT GAGCCAAGCC
GAGCGCAAAA CCCTGATAAG TCTGTTGCGC AAGGTCTATC TTCCGGCTGA CTGA
 
Protein sequence
MKRPGYDGGS TLIRPYLSGT MAEKSITQAL RNPTPVRQPA RAAKAPVQAS EAADRMDTSF 
LETLIGYNAR RAALVVIAEF LPRMAQFGLR PVEFSVLTLI GHNPGITSRQ LCATLDILPP
NLVGMIKHLE KLGMLEKRDH PTDRRAQGLH LTETGKATLP LAEQTASAIE IDATSRLSQA
ERKTLISLLR KVYLPAD