Gene Pnap_0801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0801 
Symbol 
ID4687211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp843281 
End bp844321 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content65% 
IMG OID639833798 
Productinner-membrane translocator 
Protein accessionYP_981041 
Protein GI121603712 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTT CGATCGCCAG CATTTTGCTG CTGGACGGCG TGACCAATGG TGCCATTTAC 
GCCCTGTTGG GCCTGGCGAC CGTGCTGGTC TTCACCGTCA CACGGGTCAT CTTCATCCCG
CAAGGCGAGT TTGTTGCCTA TGGCGCGCTG ACGCTGGCCA TCCTGCAAAC CGGGAAGATT
CCCGGCACCG TCTGGCTGCT CTTGATTCTG GCGGCCATCG CCGCCGCGAT GGATGGCGTG
GGCGCCTGGC GTCGCCACCA CAATGCCCTG GCCACCCTGA AGTCGGCGCT CAAGACCCTG
GTGATTCCTG TCGTGGTGGC CGGCCTGACC GCCTGGGCGG CGCCGCTGCA AATGCCGCTG
CTGCTGCAGG CGCTGCTCAG CGTGTGCATC GTCACCGCCT TTGGCCCGCT GGTGTACCGC
GTGGCCTACC AGTCGCTGGC CGATGCCTCG CCGCTGGTGC TCTTGATTGT CTCGGTCGGC
GTGCATTTCG CCATGACCGG GCTGGGCCTG CTGTTTTTTG GCGCCGAGGG ATTCCGCAAC
CCGTCGTTCT GGGATCTGCG CATGAGCCTG GGCGCGCTCA CCCTGAGCGG CCAGGCCATC
ATCATCATGC TCACCTCGGT CGCACTGATC GTGCTGCTCT GGCTGTTTTT TGAACGCTCG
CTCTACGGCA AGGCGCTGCG CGCCACGGCG GTGAACCGGC TGGGCGCGCG CCTGATGGGC
ATTTCCTCGC AGTCGGCGGG CCAGCTGACG TTTGCCATGG CGGCGCTGAT CGGCGCGTTG
TCGGGCCTGC TGATCGGGCC GACGACCACG ATTTTTTACG ACTCGGGCTT TCTCATCGGC
CTGAAGGGCT TCGTGGCGGC GGTGGCGGCA GGTCTGGCCA GCTACCCCGG CGCGCTGCTG
GGCGCGCTGT TCGTCGGCCT GGTCGAGGCG TTTGCCTCCT TCTGGGCCAG TGCTTTCAAG
GAAGTGATTG TGTTTACCCT GATTTTGCCG GTGCTGTTGT GGCGTTCCCT GCAAGGCGGA
CATTCGGATG AGGAGCACTG A
 
Protein sequence
MDFSIASILL LDGVTNGAIY ALLGLATVLV FTVTRVIFIP QGEFVAYGAL TLAILQTGKI 
PGTVWLLLIL AAIAAAMDGV GAWRRHHNAL ATLKSALKTL VIPVVVAGLT AWAAPLQMPL
LLQALLSVCI VTAFGPLVYR VAYQSLADAS PLVLLIVSVG VHFAMTGLGL LFFGAEGFRN
PSFWDLRMSL GALTLSGQAI IIMLTSVALI VLLWLFFERS LYGKALRATA VNRLGARLMG
ISSQSAGQLT FAMAALIGAL SGLLIGPTTT IFYDSGFLIG LKGFVAAVAA GLASYPGALL
GALFVGLVEA FASFWASAFK EVIVFTLILP VLLWRSLQGG HSDEEH