| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0744 |
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| Symbol | |
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| ID | 4687418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 788918 |
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| End bp | 789583 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639833739 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_980984 |
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| Protein GI | 121603655 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0220327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGC CTGTGCAAAG TACTGCGATT TCAGCGCAAA TTTCAAGAAG AAAATGGCTC
TTGCGCTTAT CTGGCGGGTG TGTTCCGCTA TTATTTTCAG AGCATTCCAG TGCTGGCGGG
CAGGTCGAGG AGCCGCTGAT GGATTCGGTG CGCACGGCGC TGGGTTCAGC CATTGCCAAC
CAGGCGCCGC CGGTACCGGA GTTCAGGAAC ACTGAAAGCA AACTGGCGTA CCTGCGCTGG
CTGGGCGCCA TGAGCGAGCG GCTCAAGAAG AAAATGCCGG AACTGCAGAT TCGCCAGGAG
TTTTTGCAGG CGGTCTGGTA CGAGAGCAAG CGTGCCGGAC TGGACGTGAC GCTCGTCATG
GGCCTGATCC AGGTCGAAAG CAATTTCCGC AAGTTCGCCG TGAGCAGCGT CGGGGCGCGC
GGCTACATGC AGGTCATGCC CTTCTGGACG CGCGTGATTG GCGATGGCGA CCCGGGAAAA
CTGTTCCACA TGCAGACCAA TCTGCGCTTT GGCTGCGTGA TTCTTCGCCA CTACCTGGAC
CGGGAGCGCG GCGACAATTT TCTGGGCCTG GGCCGCTACA ACGGCAGCCG GGGCCGGGCG
CCGTACCCGG AAGCGGTGTT TGCCGCGCAA CGCGGCTGGC TGCCCAATGA CCGAACGGTT
GGCTGA
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| Protein sequence | MTVPVQSTAI SAQISRRKWL LRLSGGCVPL LFSEHSSAGG QVEEPLMDSV RTALGSAIAN
QAPPVPEFRN TESKLAYLRW LGAMSERLKK KMPELQIRQE FLQAVWYESK RAGLDVTLVM
GLIQVESNFR KFAVSSVGAR GYMQVMPFWT RVIGDGDPGK LFHMQTNLRF GCVILRHYLD
RERGDNFLGL GRYNGSRGRA PYPEAVFAAQ RGWLPNDRTV G
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