Gene Pnap_0705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0705 
Symbol 
ID4688027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp749121 
End bp749480 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content62% 
IMG OID639833699 
Producthistidine triad (HIT) protein 
Protein accessionYP_980945 
Protein GI121603616 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.141106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.441968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATT CTGAAAACTG CATTTTCTGC AAAATCGCCG CCGGCGCCAT TCCCAGCCGC 
AAGGTGTACG AAGACGACGA CTTGTTCGCC TTTCACGACA TCCATCCCTG GGCGCCGGTG
CATTTTTTGA TCATTCCCAA ACTGCATATC CCGTCGATGG CGCAGGTCGG ACCCGAGCAT
GCGGCGCTGC TGGGACGGAT GATGGTGCTG GCGCCCCGGC TGGCGGTGGA GCAGGGCTGC
AATCCCTACC CGGCGGGCGG TTTTCGCACC GTGATCAATA CCGGCGAAGA GGGCGGCCAG
GAAGTGCATC ACCTGCACAT GCATGTGATT GGCGGCCCCC GGCCGTGGCT CAAGGGCTGA
 
Protein sequence
MSHSENCIFC KIAAGAIPSR KVYEDDDLFA FHDIHPWAPV HFLIIPKLHI PSMAQVGPEH 
AALLGRMMVL APRLAVEQGC NPYPAGGFRT VINTGEEGGQ EVHHLHMHVI GGPRPWLKG