Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0692 |
Symbol | |
ID | 4687074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 739393 |
End bp | 740148 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639833686 |
Product | ABC-2 type transporter |
Protein accession | YP_980932 |
Protein GI | 121603603 |
COG category | [S] Function unknown |
COG ID | [COG1511] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.815374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.797242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCT GGCAAACGCT TTTCTACAAG GAAGTCCTGC GCTTCTGGAA GGTTGGTTTC CAGACCGTCG GCGCTCCCGT GCTGACGGCC GTGCTCTACA TGCTGATCTT CGGCCATGTG CTGCAGGGGC AGGCGCTGGT GTATGGCAAG GTGACTTACA CCGCTTTCCT GGTGCCCGGC CTGGTGATGA TGAGCGTGCT GCAAAACTCC TTCGCCAACA GCTCCTCGTC GCTGATCCAG AGCAAGATCA TGGGCAGCCT GGTGTTTGTA CTGCTCACGC CGCTGTCGCA CTGGGACTGG TTCTGGGCCT ATGTGGGCTC GTCGGTGGTG CGCGGCCTGC TGGTCGGCGC CGGCGTGTTC GTGGTGACGG TGTATTTCGG CCAGCCCGGT TTCGTGGCGC CGCTCTGGAT CGTGGTGTTT GCCGTGCTGG GCTCGGCCAT GCTGGGCGCG CTGGGCGTGA TTGCCGGCTT GTGGGCCGAG AAATTCGACC AGATGGCGAC CTTCCAGAAC TTCATCATCA TGCCGATGAC TTTTCTGAGC GGCGTGTTTT ATTCCATCCA CTCGCTGCCG CCGTTCTGGC AGAAGGTCAG CCACCTGAAC CCGTTTTTCT ACATGATCGA CGGTTTTCGC TACGGCTTTT TTGGCGTCAG CGACGTTTCG CCCTGGCTCA GCCTGGGCCT GGTGCTGACG GCATTTTTCA TCATTAGCGC CGTGGCGGTC AACATGCTGC GCACCGGCTA TAAGATCAGG CATTGA
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Protein sequence | MTGWQTLFYK EVLRFWKVGF QTVGAPVLTA VLYMLIFGHV LQGQALVYGK VTYTAFLVPG LVMMSVLQNS FANSSSSLIQ SKIMGSLVFV LLTPLSHWDW FWAYVGSSVV RGLLVGAGVF VVTVYFGQPG FVAPLWIVVF AVLGSAMLGA LGVIAGLWAE KFDQMATFQN FIIMPMTFLS GVFYSIHSLP PFWQKVSHLN PFFYMIDGFR YGFFGVSDVS PWLSLGLVLT AFFIISAVAV NMLRTGYKIR H
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