Gene Pnap_0692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0692 
Symbol 
ID4687074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp739393 
End bp740148 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content60% 
IMG OID639833686 
ProductABC-2 type transporter 
Protein accessionYP_980932 
Protein GI121603603 
COG category[S] Function unknown 
COG ID[COG1511] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.815374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.797242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCT GGCAAACGCT TTTCTACAAG GAAGTCCTGC GCTTCTGGAA GGTTGGTTTC 
CAGACCGTCG GCGCTCCCGT GCTGACGGCC GTGCTCTACA TGCTGATCTT CGGCCATGTG
CTGCAGGGGC AGGCGCTGGT GTATGGCAAG GTGACTTACA CCGCTTTCCT GGTGCCCGGC
CTGGTGATGA TGAGCGTGCT GCAAAACTCC TTCGCCAACA GCTCCTCGTC GCTGATCCAG
AGCAAGATCA TGGGCAGCCT GGTGTTTGTA CTGCTCACGC CGCTGTCGCA CTGGGACTGG
TTCTGGGCCT ATGTGGGCTC GTCGGTGGTG CGCGGCCTGC TGGTCGGCGC CGGCGTGTTC
GTGGTGACGG TGTATTTCGG CCAGCCCGGT TTCGTGGCGC CGCTCTGGAT CGTGGTGTTT
GCCGTGCTGG GCTCGGCCAT GCTGGGCGCG CTGGGCGTGA TTGCCGGCTT GTGGGCCGAG
AAATTCGACC AGATGGCGAC CTTCCAGAAC TTCATCATCA TGCCGATGAC TTTTCTGAGC
GGCGTGTTTT ATTCCATCCA CTCGCTGCCG CCGTTCTGGC AGAAGGTCAG CCACCTGAAC
CCGTTTTTCT ACATGATCGA CGGTTTTCGC TACGGCTTTT TTGGCGTCAG CGACGTTTCG
CCCTGGCTCA GCCTGGGCCT GGTGCTGACG GCATTTTTCA TCATTAGCGC CGTGGCGGTC
AACATGCTGC GCACCGGCTA TAAGATCAGG CATTGA
 
Protein sequence
MTGWQTLFYK EVLRFWKVGF QTVGAPVLTA VLYMLIFGHV LQGQALVYGK VTYTAFLVPG 
LVMMSVLQNS FANSSSSLIQ SKIMGSLVFV LLTPLSHWDW FWAYVGSSVV RGLLVGAGVF
VVTVYFGQPG FVAPLWIVVF AVLGSAMLGA LGVIAGLWAE KFDQMATFQN FIIMPMTFLS
GVFYSIHSLP PFWQKVSHLN PFFYMIDGFR YGFFGVSDVS PWLSLGLVLT AFFIISAVAV
NMLRTGYKIR H