Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0628 |
Symbol | |
ID | 4686494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 663843 |
End bp | 667040 |
Gene Length | 3198 bp |
Protein Length | 1065 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639833622 |
Product | phage integrase family protein |
Protein accession | YP_980868 |
Protein GI | 121603539 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGGC TCAAGGCTAC ACAGACGCCT GTTGATAAAA CAGACGAGGT TGCTGCTCGA CCGAAAAACA ACCGTGGCCG CAAGGCAGGG CAGCCGCCGA CACCACGAAC GGCGCTGCAA AAGTGTATTT GGCAGAAAGA GCAGTTTGTC GCGCGCACAA GCGAACTGAC CGGCCGTACC GTGTATGAAA ACCAGTCACA CGACCAATAC CTTATTTCTC CCGCTTGGAA TCAAGCGGCC GTCCAGGTGG TCGTTGCCGA GTGGAATGCT CGTATCTACG CACTTCCAGG AAGCAACCGA CCGCCAGCGG GCCAGCGGGC TGCGGTTGCG GCGCTGTCAG ATTGTGTTTC GCCACAAGCC TTCGGAGAAG GCCTGAACGT ACTTTTGCTC CAAGAGTTCA AAGCAAAGCT CGACAATGAA GGCTTCCACT TCTCCGGCCA GCAGTTTTTG ACGCAGTTGA TGCTAGCGAT GTGGTGCAAA GGGCTGGTGG CGTGGCCACT GACCGTTCAA GAGCCGTTTC CGTCGGCTAT CTTGACCCTC AATAATGCGG GATGGAGCGC CGAGTTCGTA GTCGTTCTGA ACTATGTGCG AAAGTACCTC GCCCGCGACA CCCTTACCGA CGCTGTGACG TTTCGGTTCT TCGTGGACAT GGTGCTCTCC AGGGCTGGAG TCGTAGAACT TGGCGACATA ACTCCCACCA CCATGCAGGT CCAGCCAGCG CCGACGCGAA AGAGGAAACA GCGACCCATG GCGTTTACAG GTCTGCTGCA GGCGCTAAGG GATGAATACT CCATCAAACA GGTTCCGTGG GTACTGGAAG ACTTCGGCTT TTATCAGGCC AGGTCTGGTC ATCTGCGCCG CAAGGAAAAT TTCGAATGGG CTCTTGAGAT TGACCCAACA ATGATCGAAT GGGTGGAATT GGCAAAGCAG CATCTTGCCG AAAATCCGAC GAACTATAGG AAACGCCGGA GTGCGGTGAA TGTCTTTATC GAGCACATCG CCAAAAACTC GACTGTCAAC CGAAGTCCTG CAGGCTACTG TGACATTAAG CGTCGTCCTG ATCCTCTCTT TCACATCGAT GGCAATAAAG GGCGTCAGAC GATGGTGGTG GTGTACCAGT TCCTCAACGA GGTTCTGCAC AAAGTCTGTA TCCAGGCTGA CGACAATGCA TTTCCTATTT TGATGCCGGG CTTTGCCAAC CCGCTGGTCA AACAGACGTT TATCGGTGTC AACAAGGGAG AGACACACCG CGAGTCCATG CCAACGCGTC TCATTCGCCA AGCGATGAGC ATACTGACCG AGAACGATTT CGCTTGGGCG CGAGAGGTCG GAAAGCTCTC AGACAACTTC CGTTGGAAAA ATCCAGAAAC CCGAGAATTT GAGAGCGTCT GGAGCCCTGT GCGTACATAC GCTCTTATGG CCAAGCTTAT CCTCCCAGCT CGTACCTATC AAATTCGGCA TCTCGACAGC AGTGAAGGCG ATTCGCTCAG GTATGAAGAG AACGGAACAT GGGGACCAAA TACGGGAAAA CACGCGCCAT CTAATGCGGG CGTCGAGCGT GGTGTGTTCC GGCAATACAA GCGCAAGGAC GGTAGTCTCG GCGCTGTGCT GTACTTCAAC ACCAATAAGA CTGGGGACAT CGATAAAGAC AAGGACAAGA CCGGTTTCGT CATGCCGTGG GAGAAGCTGG ACGCACTTCA ACTGTTTGCA CGGATGCGCA ACTGGCAGGA AAAGTACAAC CAGTTAGATG GCCCAACCAA TTGGACCGAC ATCAACGAAC TGAAGGCGGC AAAGCACGTT GAGGACCTTC GCAAGCTCGG CACCAACTTA TTCCTCTTCC GTGACCCCTG CCATCAACAT CGACCAGACC TTCCTGTGTC TGATGTTCGA CTGCGCAACC TCTGGTTGAG GCTCATGGAA GAACTGGAGA AAAGGCTGGC GCTGGCTGGT GAAACCCTCG CAAACGGCGA GCCGATAAAA CTTGTTATCA GCTCAACGAA AAGAAGCGCG CCATCGGCGG CACTGTTCGA CCTTCACACG CTGCGGGTCA CAATGATTAC CGCTATGTAC GAAGAGGGCA TTCCGCCGGA AATCCTCATG AAAATTGTCG GGCATGCCTC GATCATCATG ACGCTCTACT ACGTCAAGCT CAACGCCGAA ACCATTTCGG TGCAGTTGGA TGCTGCAGTG CAGGAGCGTC AACGCAAGGA ACAGTCCGAG ATGGCAGGGT TCATCCAGCG CGCCAGCAGA ATGGAGCTGG AGCGCGCCGT CGCCAGAACG CACCCGTCGG CGCTCGATGC CATCACCAGC GGAACTGGCA CAGGTTTGGT CGTCATGGAC CACGGCGTGT GTCCGGTTGC AGCAAGGCGT TGCCATGAAG GTCTCGCCTC GATGGACCCA AGCTCTGGTT TCATCCGGTA TCTGGCTGTC CCGGGTGGAG CAAGCAATTG CGTCCGTTGC CGATTCTTCG TCAGTGGTCC CGCGTTCCTG CTTGGGCTTG AGGCCCACGT CATTGACCTG TCGTACAGAC TGCGCAAGGC ATCGGTGTCA TTTGAGAAGT CCCAACTGCG ATTCGATGCC CTTTCGAACC AATTTGCCGA CGCTCTTGAA AACGTGACCC CGTTCTCGCA GCAAAGAGAC CTGGAAATTG CCGAAACCGC GCTGGAGTCA GTGACCGCCG AGGTTGATGC GATTGCGCTC AGCCTTCAGT GTGCTTACGC CCTCACGGAG CAAAGCATTC ACATCAACAA CCTTGGCGTC AACAAGCCCG GTGGCAGCGG ACTGTCACTG GTGGCAGTGG GCGGCACAGG CGAGTTGGAA GCGGTTCTCA CTGAAACGCA CGAGTTCGAG CAGTTGCATC GTATTTGTGA GAGCGCAATG CTGTTTGACG GGCTGAAAAT CGACTGGCAA CACCCCAATC TGGAACGCGC CCGTCTGTTT GACAGAATGC TGCGCGCATC CGGCTGCGAG CCGCACTTCT CGCTTCTAGA CGATGAGGAT GCGCTCGGTG CGGCTAATGC GATGGGAAAG TTCTTGTACG CCAGGCTGGG GCCAAAAACA GTCCATGATC TCATGGACGG CCGCACCACG CTGCGGGCAC TCGGTATGGA AAAGGCTTTT GCAGACCAGC TTCAGGCCAT GACGCCCAAG TCCCTTGCCT TGAGCCGCAC AATTTTTATT GAAGGCAACT CCTCATGA
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Protein sequence | MTRLKATQTP VDKTDEVAAR PKNNRGRKAG QPPTPRTALQ KCIWQKEQFV ARTSELTGRT VYENQSHDQY LISPAWNQAA VQVVVAEWNA RIYALPGSNR PPAGQRAAVA ALSDCVSPQA FGEGLNVLLL QEFKAKLDNE GFHFSGQQFL TQLMLAMWCK GLVAWPLTVQ EPFPSAILTL NNAGWSAEFV VVLNYVRKYL ARDTLTDAVT FRFFVDMVLS RAGVVELGDI TPTTMQVQPA PTRKRKQRPM AFTGLLQALR DEYSIKQVPW VLEDFGFYQA RSGHLRRKEN FEWALEIDPT MIEWVELAKQ HLAENPTNYR KRRSAVNVFI EHIAKNSTVN RSPAGYCDIK RRPDPLFHID GNKGRQTMVV VYQFLNEVLH KVCIQADDNA FPILMPGFAN PLVKQTFIGV NKGETHRESM PTRLIRQAMS ILTENDFAWA REVGKLSDNF RWKNPETREF ESVWSPVRTY ALMAKLILPA RTYQIRHLDS SEGDSLRYEE NGTWGPNTGK HAPSNAGVER GVFRQYKRKD GSLGAVLYFN TNKTGDIDKD KDKTGFVMPW EKLDALQLFA RMRNWQEKYN QLDGPTNWTD INELKAAKHV EDLRKLGTNL FLFRDPCHQH RPDLPVSDVR LRNLWLRLME ELEKRLALAG ETLANGEPIK LVISSTKRSA PSAALFDLHT LRVTMITAMY EEGIPPEILM KIVGHASIIM TLYYVKLNAE TISVQLDAAV QERQRKEQSE MAGFIQRASR MELERAVART HPSALDAITS GTGTGLVVMD HGVCPVAARR CHEGLASMDP SSGFIRYLAV PGGASNCVRC RFFVSGPAFL LGLEAHVIDL SYRLRKASVS FEKSQLRFDA LSNQFADALE NVTPFSQQRD LEIAETALES VTAEVDAIAL SLQCAYALTE QSIHINNLGV NKPGGSGLSL VAVGGTGELE AVLTETHEFE QLHRICESAM LFDGLKIDWQ HPNLERARLF DRMLRASGCE PHFSLLDDED ALGAANAMGK FLYARLGPKT VHDLMDGRTT LRALGMEKAF ADQLQAMTPK SLALSRTIFI EGNSS
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