Gene Pnap_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0617 
Symbol 
ID4686080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp652245 
End bp653270 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content63% 
IMG OID639833611 
Producthypothetical protein 
Protein accessionYP_980857 
Protein GI121603528 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGAC GCTTCGCGCT GACTCAATAC GCATGCTTTT CGAGGCGTGA CGCCGGATCA 
CTTGCACTGG CCGCAGTGCT TGCAGTGGGC TGCGCCCTCA CGGCATCGAC GGCCCTTGCG
CAGGACTTTC CGACCAAGGC GGTGCGCATC GTCACACCGT TTCCAGCTGG CAGCGGGCCG
GAAGTCGCGC TGCGGCTGGT CGCCGACAGG TTGTCAAAGC TCTGGAGCCA GCCGGTCATC
GTGGACAACC GGCCGGGTGC CAGCGGTTTC ATCGCGATTC AGGCGATCAG GCGCGCCGCG
CCGGACGGCC ATGAACTGCT GCAGATGGAC AACGCGCAAA TGGCGGCCCA GCCTTTCCTG
TTCAAGAAGC TGCCGTATGA CCTGCTGCGC GACTTCGAGC CGCTGACACC CATCTTTCGC
AACTACTTCT TCGTCAATGT GCCGGCTGGC AGTCCCTACA AGAACATGGC CGACCTGATT
GCCGCCGCCA AGGCAAAACC CGACCATGTG AACTATGGCT CCTGGTTTGT GGGCAGCCCC
GGCCACATCG GCGCGGCCAT GCTGGAGACG GCCACCGGAA CCAGGATGAC GCACGTGCCG
TACAAGGAAA TGTCGCAGCT GTACGTAGGC GTGGCCAGCC AGGAAGTGGA CTGGGCCTTT
GGCAGCGCGG CCAGCGCGGG CGCCATGCAG CGCGCCGGCA AAAACCGCTA CCTGGCCGTC
GCCGCGCCCA AGCGCGTCGC CGGCTTTGCG GAGGTGCCGA CGATTGCCGA ATCGGGCGGA
CCTGCCGGGT TTGAACTGAG CGCCTGGACG GCCTTGCTGG CGCCCAAGGG GACGCCCAGG
GCGACGGTGG AAAAGATTCA GAAAGACGTG GCCTCGGTGA TGGCCGATCA GGATTTCAAG
GACAAATACG CGGCCATGTA TTACGAGCCC TATGCCCTGA ACACCGAAGG CTTTTTGCAG
CAGCTGCGCA CTGACTCGAA GCGCTACGGC GACACCATCA AGCGGCTGAA TATCTCGCTG
GACTGA
 
Protein sequence
MTRRFALTQY ACFSRRDAGS LALAAVLAVG CALTASTALA QDFPTKAVRI VTPFPAGSGP 
EVALRLVADR LSKLWSQPVI VDNRPGASGF IAIQAIRRAA PDGHELLQMD NAQMAAQPFL
FKKLPYDLLR DFEPLTPIFR NYFFVNVPAG SPYKNMADLI AAAKAKPDHV NYGSWFVGSP
GHIGAAMLET ATGTRMTHVP YKEMSQLYVG VASQEVDWAF GSAASAGAMQ RAGKNRYLAV
AAPKRVAGFA EVPTIAESGG PAGFELSAWT ALLAPKGTPR ATVEKIQKDV ASVMADQDFK
DKYAAMYYEP YALNTEGFLQ QLRTDSKRYG DTIKRLNISL D