Gene Pnap_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0608 
Symbol 
ID4687213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp640253 
End bp641245 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content62% 
IMG OID639833602 
Producthypothetical protein 
Protein accessionYP_980848 
Protein GI121603519 
COG category[C] Energy production and conversion 
COG ID[COG4313] Protein involved in meta-pathway of phenol degradation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAC ACCTCGCACC ACGCAGCCTG GCCAGGCTTG CCGGCACTGC TTTTGTGACC 
CTGCTGGCCG GCCACGCCAT GGGCCAGTCG CCAGCGGTGA GCCAGCCCGG CGGACTGAAT
CTGGGGAATA CCAGCTTCTA CGACGGCTTT TCAGGCCCCC CAGGCTGGAC CTGGTTAAGC
ACGGTCCTGC ATTCGAGCGC CAACAAAATT GTGGACTCCA ACGGCAACGC CAGCCCGGTG
TTCACGGATC CCAAAATCAA CAGCACGGTT TTTGTCAACC AGATCACCTA TGCCATGCCA
GCGTCGATTG GCGGCTGGCG GCCGGCCCTC ATGGCGATCC TGCCGGTGGT GGCGCTGGAC
ACCAGTTTTG GCCCGGGGCC ATCGCTCAAG GACGGCGGCA CCGGTGCCGG CGACATCACG
CTGGAAGCCT CGCTGCAGGC CGAACCCGTC ATGAACGCAG GGGGTGCGCC GGTGTTTGTG
CAGCGCCTCG CAGCTGCAGC CATTCTCCCC ACCGGTCGCT ACGACCAGAA CGTGGACATC
AACCAGGGTT CCGGCTATGC GTCGTTCAAC CCGTACTGGG CGGCAAGCTT TTTTCCTGCA
CCGCGCTGGG AAACCAGCTG GCGCCTGCAC TACCTCTACA ACTTCAAAAA CAACAAACCC
GCCTCCAGCG CACCCCGGCC ATTCAACGGC CAGCCAGTCA GCACCACGCA GGCTGGCGAC
GCGGCCTGGG TCAACTTCGC CACATCGTAT TCCGTCACGC CTGACGTCAG CGTTGGCATC
AATGGCTATT TTTTCCAGCA GCTGTCGGAC AGCCGGGCCA ACGGCACACG GCTGGCCGAT
TCACGCGAGC GGGTACTGGG CATAGGGCCG GGAATGATGT GGCGCATCAG CCCGAAAAAA
GCCTTGTGGA TCAACGCCTA CACCGAAAGC ATGGTGCGCA ACCGGGCGGC CTCGCCACTG
AGCTTGCAGG CACGCATGGT CATTAATTTT TAA
 
Protein sequence
MKSHLAPRSL ARLAGTAFVT LLAGHAMGQS PAVSQPGGLN LGNTSFYDGF SGPPGWTWLS 
TVLHSSANKI VDSNGNASPV FTDPKINSTV FVNQITYAMP ASIGGWRPAL MAILPVVALD
TSFGPGPSLK DGGTGAGDIT LEASLQAEPV MNAGGAPVFV QRLAAAAILP TGRYDQNVDI
NQGSGYASFN PYWAASFFPA PRWETSWRLH YLYNFKNNKP ASSAPRPFNG QPVSTTQAGD
AAWVNFATSY SVTPDVSVGI NGYFFQQLSD SRANGTRLAD SRERVLGIGP GMMWRISPKK
ALWINAYTES MVRNRAASPL SLQARMVINF