Gene Pnap_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0605 
Symbol 
ID4687522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp637033 
End bp637815 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID639833599 
Productenoyl-CoA hydratase 
Protein accessionYP_980845 
Protein GI121603516 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.233438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATC CAGACATTCA ACTTGACATT TGCGGCGACG AACAGGAAGT CGCCGTGGTC 
CGCCTGACGC GCGGCGCCAA ACGCAACGCG CTGTCCGACG GCCTGGTGCT GGCGCTGCGC
AACATCTTCG AGCAGCTGCC CGCCACCGTG CGCGCCGCGG TGATCGACGG CGAAGGCCCG
CATTTCTGCG CCGGCCTGGA CCTGAGCGAA CTCAAGGAGC GCGATGCCGG CGCCGGCCTG
CACCACTCGC GCATGTGGCA CGCCGCGCTG GAGCGCGTGC AATACGGCCC GGTGCCGGTG
GTGGCCGCGC TGCACGGCGC GGTGGTCGGC GGCGGGCTGG AGCTGGCCAG CGCCTGCCAC
ATCCGCGTGG CCGACGAAAC CACCTTCTAC GCGCTGCCCG AAGGCTCGCG CGGCATTTTT
GTCGGCGGCG GCGGCGCGGT GCGCATTCCG CGCCTGATTG GCGCGGCGCG CATGACCGAC
ATGATGCTGA CCGGCCGCGT CTATAACGCG CAGGACGGCG AACGCATCGG CCTGGCGCAA
TATTTGGTGC CCGCCGGAAC GGCTTTCGAC AAGGCGCTGG AGCTGGCCAA ACGCATCGCG
CAAAACGCGC CGCTGACCAA CTACGCACTG GTGCACGCGC TGCCGCGCAT CGCCGAGCAG
CCGGCCGACC AGGGCTACAT GACCGAGGCG CTGATGGCCG CCATTGCCCA GAGCGCGCCC
GAAGCCAAGC AGCGCGTGCG CGCCTTCCTT GACGGCAAGG CCGAAAAAGT CAGCAAGGAC
TGA
 
Protein sequence
MTHPDIQLDI CGDEQEVAVV RLTRGAKRNA LSDGLVLALR NIFEQLPATV RAAVIDGEGP 
HFCAGLDLSE LKERDAGAGL HHSRMWHAAL ERVQYGPVPV VAALHGAVVG GGLELASACH
IRVADETTFY ALPEGSRGIF VGGGGAVRIP RLIGAARMTD MMLTGRVYNA QDGERIGLAQ
YLVPAGTAFD KALELAKRIA QNAPLTNYAL VHALPRIAEQ PADQGYMTEA LMAAIAQSAP
EAKQRVRAFL DGKAEKVSKD