| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0567 |
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| Symbol | |
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| ID | 4687891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 599861 |
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| End bp | 601135 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639833562 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_980808 |
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| Protein GI | 121603479 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCTT TCCCTTCCCT GAATCATGAG CCCATCCACC CCGAGGCGGG CCGCCCGCTG
CGCCGGGCGC GCTGGATTGG GCTCGGTGTG CTGGCGTTGC TGCTGGGTGG CGCCGGTGCG
CGCGCCTATG TCAACGCGGC CCACGCCAAA TCCGTCGAGG AGCGCACCGG GCGCAGCGCC
ATCAGGTCGG TGCTGACCAC CCAGGCTAGG GCGGCCCAAG GCCTGCGCAC GGTGGCCCTG
CCGGCCACGC TGCGCGGGCG CAACGAAGCG GCGCTCTACG CCCGCACCAA CGGCTATGTC
CGTTCCTGGA GCAAGGACAT CGGCGACAAA GTGAAAAAGG GCGATCTGCT GGCCCTGATC
GACACGCCCG AGGTGGACCA GGATCTGGCC CAGGCGCAGG CCACGCAGGA GCAGATCAAG
GCCCGGCTGG CCCTGGCCCA GTCGTCCCTG GCGCGCTGGG AAGGCCTGCG CCAGCGCGAC
GCGGTGTCGC AGCAGGAACT CGATGAGCGG CGCGCTGCCC AGCAGCAGGC GCTGGCCGAT
CTGGCCGCCT CGCAGGCCAA TGTGCGGCGC CTGCGGCAGA TGCACGACTT CGGCCGCATT
ACCGCGCCGT TTGACGGGGT GGTGATCAAG CGCAATGTCG AGGTAGGCGC GCTGGTGGCC
GCCGGCAGCG CCACGACTAC CCGCGAGCTG TTCTACCTGG CGCAGTCCGA CGCCCTGCGC
CTGACGGTGG CGATTCCGCA GGTCTATGCG GCCGATGTGG CGGTGGGCAA GGAAGTCAGC
ATCAAGCTGC TGGAGCGCCC GAACGCGCCG GGCAAGGGAC AGATCACCCG GGTCTCGGGC
GGGGTGGACG TGGCCACGCG CTCGGTTCAG GTCGAGGTCA GCATGGACAA CCAGAGGGGA
GACTTTCTGC CCGGCGCGTA TGTTGAGGTG GCTCTGCCGC TGAGCGGCGC GGCCATGACC
CTGCTGCTCT CGCCCAGCAC CCTGCAGTTT CGCCAGGACG GCGCGCAGGT AGCCGTGGTG
GGCGAGGACG GCAAGGTCAG CCTGCGCCAG GTCAAGCTGG GCCGGGATCT GGGGCGCTCG
GTGGAGGTGA TTGCGGGCAT TTCGCCCAAG GACGCCATCA TCCTGAACCC GCCCGACACG
ATTGAAGAGG GCGAGCGCGT GCTGGTCCGG AAAGCGCCCG AGGACAAGCC GGTGCCGAAA
CCGGCAGGCG GCGCCTCGCG CCCTGCCGAG GCCAAGGCTG ACGGTGACAA GGACGCCAAG
GGTGGCAAGG CATGA
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| Protein sequence | MRSFPSLNHE PIHPEAGRPL RRARWIGLGV LALLLGGAGA RAYVNAAHAK SVEERTGRSA
IRSVLTTQAR AAQGLRTVAL PATLRGRNEA ALYARTNGYV RSWSKDIGDK VKKGDLLALI
DTPEVDQDLA QAQATQEQIK ARLALAQSSL ARWEGLRQRD AVSQQELDER RAAQQQALAD
LAASQANVRR LRQMHDFGRI TAPFDGVVIK RNVEVGALVA AGSATTTREL FYLAQSDALR
LTVAIPQVYA ADVAVGKEVS IKLLERPNAP GKGQITRVSG GVDVATRSVQ VEVSMDNQRG
DFLPGAYVEV ALPLSGAAMT LLLSPSTLQF RQDGAQVAVV GEDGKVSLRQ VKLGRDLGRS
VEVIAGISPK DAIILNPPDT IEEGERVLVR KAPEDKPVPK PAGGASRPAE AKADGDKDAK
GGKA
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